Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2210 ATGGTTGCTCAGTTTGGGTTTGTAACTGGTGATACACTCCTAGGAGGAAAGAAGTTGATCATTGGGCTACCCTACAAATCTGGTTTCACTGAATTTGTGGATGTAAAGCTCGACCCTAGAACATACAATTTGGTCCATGTCACTGGATACTCCATTGACATATTCAACGCCACAAAAGATTACATCTTAAGTAATTTCGGTTTCAATATTTCTTATGAGTTTGTGCCTTTCATCAATGAAACGGGACAAAGTAATGGGAGTTATGACAAACTTGTTGAACAGGTTTATAATCAACAGTATGATGCGGTGGTGGGAGATGTAGCAATTGTGGCCAACAGATCGAAATATGTGGATTTTACATTACCATATGCGGAGTCAGGTGTGAGGATGCTTGTACGAGTTGGGCATGCTAGACATCTAAACATGTGGATTTTTTTGCGGCCATTTAGTTGGGATCTTTGGTTGTCCATCGCAATAGGTTGTGCCTTTATAGGAGCTGCAATACAGTTCATGGAACGTAACAAATATAATGATGCCGGAGCAGCACTTGAAGGGTCACCACGTCGACAACGACCTAAGGGAATATCAATCATCTGGCTTCCTCTCGCACAAGTGGTGCTTCCTGAAAGTAATTTTAATTAG 642 0.4128 MVAQFGFVTGDTLLGGKKLIIGLPYKSGFTEFVDVKLDPRTYNLVHVTGYSIDIFNATKDYILSNFGFNISYEFVPFINETGQSNGSYDKLVEQVYNQQYDAVVGDVAIVANRSKYVDFTLPYAESGVRMLVRVGHARHLNMWIFLRPFSWDLWLSIAIGCAFIGAAIQFMERNKYNDAGAALEGSPRRQRPKGISIIWLPLAQVVLPESNFN* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2210 213 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 17 209 - -
Dod05g2210 213 SUPERFAMILY Periplasmic binding protein-like II 12 160 - -
Dod05g2210 213 PANTHER GLUTAMATE RECEPTOR 17 209 - -
Dod05g2210 213 SMART GluR_14 18 202 IPR001320 GO:0015276|GO:0016020
Dod05g2210 213 Pfam Ligated ion channel L-glutamate- and glycine-binding site 45 133 IPR019594 GO:0004970|GO:0016020
Dod05g2210 213 Gene3D - 143 203 - -
Dod05g2210 213 Gene3D - 12 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2210 Dod-Chr5 47989624 47990617 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2210 16 206 Ion Channels AT2G24710 39.267 2.53e-38 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2210 K05387 - aip:107641909 268.855