Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2200 ATGCCTCCTCCACCACCAATTGATCACCATGGCGATCCTCAATCCCAATCGCAACCACAATCGGAACCGAAACCAAGCCCTAACATCCTGTCCCTGTTCCTGAAGCCAATCATCATGGTCCTCCTCACCTCCCTCTTCTTCCTCTTCCTGGGATTCGCCGCCTTCCTCCTCCTCCACCTCTTCCTCATCGGCGGCGCCATTCACCGCCTCCGCTCCCGCCCCTCCTCCTCCGACGCCAACCCTTCCCCCTCCGACGCCTTCTCCCCACGCCACCTCAGCAGGCTCCCCCATTTCCGGGTCGCCAGGGGATCCGCCCCCGGACCCGACTCCCGATGCGTCGTCTGTTTGGACGGTTTTCGCAATGGCCAGTGGTGCAGGAAGCTCGCCGGGTGCGGCCACGTTTTCCACCGCAGATGCGTGGACACGTGGCTAATCAAGGTCGCCGCGTGCCCCACGTGCCGAACACCTGTTCGATTGAATGCCGCTGCTGTCCCCAGAGAGGATTACGGTGCCCAATTTTGGACTTGCGGTGTTGTTGATGCCAATGCTCTCGCCACCTCATAG 564 0.6135 MPPPPPIDHHGDPQSQSQPQSEPKPSPNILSLFLKPIIMVLLTSLFFLFLGFAAFLLLHLFLIGGAIHRLRSRPSSSDANPSPSDAFSPRHLSRLPHFRVARGSAPGPDSRCVVCLDGFRNGQWCRKLAGCGHVFHRRCVDTWLIKVAACPTCRTPVRLNAAAVPREDYGAQFWTCGVVDANALATS* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2200 187 ProSiteProfiles Zinc finger RING-type profile. 112 154 IPR001841 -
Dod05g2200 187 MobiDBLite consensus disorder prediction 1 25 - -
Dod05g2200 187 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 88 162 IPR013083 -
Dod05g2200 187 PANTHER RING-H2 FINGER PROTEIN ATL56 13 168 - -
Dod05g2200 187 MobiDBLite consensus disorder prediction 11 25 - -
Dod05g2200 187 SUPERFAMILY RING/U-box 108 160 - -
Dod05g2200 187 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 13 168 - -
Dod05g2200 187 Pfam Ring finger domain 111 154 IPR001841 -
Dod05g2200 187 SMART ring_2 112 153 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2200 1 176 C3H Transcription Factor Family AT2G18670 40.678 2.05e-34 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2200 - - gmx:102664895 190.66