Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2183 ATGTTCGAGTGGTTGCACTTTTCTGTTATAGGCATCCTATGCCAGTCAAGAGAGTCCGACATAATTCAGTGGCAGTGGGCTGTTGAAAGTAATATGGTGGAAGTATGCAGGATCAGTGTTGAGATTGGAAATGAGCTCTCCAAGGTAGGAATGCATATTATTGAAGCCATACTCCAAGATGAATCAGGATTGTCCCACATATGTGATTTGAAGACAAATCAGCTCAAGGAGCTGATGGCAACACTGTATCATCTGCTTACAATTTTGGATGTTGACCAAGATTTCGCTCCTCGCCTCTTGTTTCATGTCATTCGATGCTGTTTTTTGCTATGTAATAACTTGGGGGGATACATGACATTGTCAGAGAGAGCCTCCCTGATACCATCACAAGTCGGTCTTTCCATCCAATCACAGAGGCAGGTCATAGTCACTCATTCGAGCTTGCCTCAATCATAG 456 0.4342 MFEWLHFSVIGILCQSRESDIIQWQWAVESNMVEVCRISVEIGNELSKVGMHIIEAILQDESGLSHICDLKTNQLKELMATLYHLLTILDVDQDFAPRLLFHVIRCCFLLCNNLGGYMTLSERASLIPSQVGLSIQSQRQVIVTHSSLPQS* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2183 151 Pfam Cell differentiation family, Rcd1-like 8 121 - -
Dod05g2183 151 PANTHER UNCHARACTERIZED 7 122 - -
Dod05g2183 151 PANTHER CELL DIFFERENTIATION PROTEIN RCD1-LIKE ISOFORM X1 7 122 - -
Dod05g2183 151 Gene3D - 3 144 IPR011989 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Dod05g2183 Rcd1 2.4e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2183 K12606 - csin:114280502 137.502