Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2179 ATGGCTCTCAATTGCGTTGTTCACCTCCTCCTCCTCCTCCTCCTCTCACGTGCTGCTCTATGTTCCTCTGCGGAGCCTCGCAACCACGAAGTGGAGGCGTTGATGAGCATAAAGGGTAGCCTGAGTGATCCACACGGTGTGTTGAGCAACTGGGATGAGTACTCAGTGGACGCGTGCAGTTGGGCCATGATAACATGCTCTTCTGATTCCCTTGTTATAGGCCTGGGAGCTCCGAGCCAATCTCTGTCTGGAACCTTGTCTGCAGCAATTGGAAATCTAACAAATCTTCGACAAGTGTTACTGCAGAACAACAATATCTCAGGCCGAATCCCTCCTGAACTTGGAACCCTTCCCAAGCTTCAGACTTTAGATCTTTCCAATAATCGAATCTCTGGGGTCATTCCTGCCTCTCTTAGTCAGTTGAATAGTCTCCAGTACCTGAGGCTCAACAACAATAGCTTGTCTGGACCATTTCCCGTGTCACTGGCCAAAATACCACAGCTTGCTTTCTTGGACTTGTCTTATAACAATCTCAGTGGACCATTGCCCAAGTTTCCAGCCAGGTCATTCAATGTTGTGGGGAACCCATTAATTTGTGGAAGCAGCTCTACTGAAGGTTGCGCTGGAACAGCAACCCTCATGCCCATTCCCTTCTCTCAAGTATCATCACAAGGAAAACACAAGTCTAGAAAACTTGCAATTGCACTTGGGGTCAGCCTTAGTTGTGTTTCTCTCATAGCTTTGCTTTTTGGGCTCCTTTGGTATAGACATAAACAGCAGCACCGAGCCATCCTGTATATCAGTGATTATAAGGAAGAGGGAGTTGTCAGTTTGGGAAATCTAAAAAATTTCACTTTCAGAGAGCTCCATCATGCTACAGATAATTTCAGCTCGAAGAACATACTTGGTGCTGGAGGTTTTGGCAATGTTTATAGGGGGAAGCTTGGTGATGGCACTATGGTGGCAGTGAAAAGGCTTAAGGATGTAACTGGAAGTTCTGGTGAATCACAGTTCAAAACAGAATTGGAGATGATCAGCTTGGCAGTTCATCGCAATTTACTTCGCTTGATTGGATACTGTGCTACTCCTAATGAAAAACTTCTGGTTTATCCTTATATGTCCAATGGCAGTGTAGCCTCCAGGCTTAGAGGCAAACCGGCTTTAGATTGGAATACTAGAAAGAGGATAGCGGTTGGAGCTGCCAGAGGCCTTCTGTACCTTCACGAGCAATGTGATCCAAAGATAATACACAGAGATGTGAAGGCTGCTAATGTGCTTCTGGATGACTGTTGTGAGGCTGTTGTAGGTGATTTTGGCCTTGCAAAGCTCCTTGACCATGCTGACTCCCATGTCACCACTGCTGTCCGTGGCACTGTTGGGCACATTGCACCAGAGTACCTTTCCACTGGCCAGTCTTCTGAGAAAACTGACGTATATGGTTTTGGCATTCTCTTGCTTGAGCTCATAACTGGAATGACAGCTCTTGAGTTTGGGAAAACGGTGAACCAAAAGGGTGCCATGCTAGAGTGGGTTAGGAAAATACAGCAAGAAAAGAAGGTTTCAGTGCTGGTGGACAAAGAGCTAGGGAGCAACTATGATAGGATAGAGGTGGGGGAGATGCTGCAAGTAGCTTTACTTTGCACTCAAAATTTGCCAGCCCACCGCCCCAAGATGTCTGATGTGGTCCGAATGCTCGAAGGTGATGGACTCGCTGAGAAATGGGCAGCATCACAAAATAATAATAATAGCAACAACAATAATAATAATAATAATCATGTTGGTCATGGCATGACCCCTTATCACAGCAGCAACAGTACTACCAGCAACACTACTTCATCCCGCCCTACCTCTGCTTCAAAGCATGATGACAGTGTTCATGATCGTTCCAGCATGTTTGGCATGACAATGGATGATGATGATGATGAACGTTCCTTGGATTCCTATGCCATGGAGCTCTCTGGTCCTAGGTGA 1971 0.4622 MALNCVVHLLLLLLLSRAALCSSAEPRNHEVEALMSIKGSLSDPHGVLSNWDEYSVDACSWAMITCSSDSLVIGLGAPSQSLSGTLSAAIGNLTNLRQVLLQNNNISGRIPPELGTLPKLQTLDLSNNRISGVIPASLSQLNSLQYLRLNNNSLSGPFPVSLAKIPQLAFLDLSYNNLSGPLPKFPARSFNVVGNPLICGSSSTEGCAGTATLMPIPFSQVSSQGKHKSRKLAIALGVSLSCVSLIALLFGLLWYRHKQQHRAILYISDYKEEGVVSLGNLKNFTFRELHHATDNFSSKNILGAGGFGNVYRGKLGDGTMVAVKRLKDVTGSSGESQFKTELEMISLAVHRNLLRLIGYCATPNEKLLVYPYMSNGSVASRLRGKPALDWNTRKRIAVGAARGLLYLHEQCDPKIIHRDVKAANVLLDDCCEAVVGDFGLAKLLDHADSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVYGFGILLLELITGMTALEFGKTVNQKGAMLEWVRKIQQEKKVSVLVDKELGSNYDRIEVGEMLQVALLCTQNLPAHRPKMSDVVRMLEGDGLAEKWAASQNNNNSNNNNNNNNHVGHGMTPYHSSNSTTSNTTSSRPTSASKHDDSVHDRSSMFGMTMDDDDDERSLDSYAMELSGPR* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2179 656 MobiDBLite consensus disorder prediction 576 656 - -
Dod05g2179 656 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Dod05g2179 656 PRINTS Leucine-rich repeat signature 165 178 - -
Dod05g2179 656 PRINTS Leucine-rich repeat signature 120 133 - -
Dod05g2179 656 MobiDBLite consensus disorder prediction 619 638 - -
Dod05g2179 656 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 7 656 - -
Dod05g2179 656 Pfam Protein tyrosine and serine/threonine kinase 299 565 IPR001245 GO:0004672|GO:0006468
Dod05g2179 656 MobiDBLite consensus disorder prediction 576 618 - -
Dod05g2179 656 SUPERFAMILY Protein kinase-like (PK-like) 278 566 IPR011009 -
Dod05g2179 656 Gene3D Ribonuclease Inhibitor 27 209 IPR032675 -
Dod05g2179 656 Gene3D Phosphorylase Kinase; domain 1 266 372 - -
Dod05g2179 656 SUPERFAMILY L domain-like 27 192 - -
Dod05g2179 656 ProSiteProfiles Protein kinase domain profile. 296 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g2179 656 Gene3D Transferase(Phosphotransferase) domain 1 373 585 - -
Dod05g2179 656 ProSitePatterns Protein kinases ATP-binding region signature. 302 324 IPR017441 GO:0005524
Dod05g2179 656 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 7 656 - -
Dod05g2179 656 SMART serkin_6 296 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g2179 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 415 427 IPR008271 GO:0004672|GO:0006468
Dod05g2179 656 SMART LRR_typ_2 141 172 IPR003591 -
Dod05g2179 656 SMART LRR_typ_2 93 115 IPR003591 -
Dod05g2179 656 SMART LRR_typ_2 117 140 IPR003591 -
Dod05g2179 656 Pfam Leucine rich repeat 118 178 IPR001611 GO:0005515
Dod05g2179 656 ProSiteProfiles Leucine-rich repeat profile. 119 140 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2179 Dod-Chr5 47574106 47578427 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2179 5 656 Receptor kinase-like Gene Family AT5G16000 61.667 0.0 785
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Dod05g2179 PK_Tyr_Ser-Thr 2.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2179 - - gmx:100797186 1067.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2179 05 47574106 47578427 Dod05g2179 05 47574106 47578427 ECH