Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2164 ATGGCTCGGCCGAGGTTGTCTTTGTTGGCACATTTTGTGACCACTCTTCTTGTGATCATTAGTTTTGCATCATCTTCTTCCTTCAACAACCCATTTGTGCAGCAAAACCTTGATAGGGTTGGGGTGCTCCCGGGTCAAACCTTTAACGTCAACTTCCAACACTATTCTGGGTATGTCACTGTCAATGATCAAGCTGGGAGGGCCCTGTTTTATTGGTTCATCGAGGCCGATCCTGAAGCCCAACCCAAACCCCTTGTCTTATGGCTCAACGGAGGGCCTGGATGTTCATCCATTGCTTATGGGGAGGCAGAGGAAATTGGCCCCTTTCATATAAATCCAGATGGAAAGTCCATTTATCTGAATCCTTACTCTTGGAACCAATTTGCCAACATTCTTTTTCTGGAGTCTCCTGTTGGAGTTGGATTTTCATATTCAAACACTTCATCTGACATTCTGAACAATGGAGATAAGAGCACTGCTGAGGACTCTCTAACATTCCTATTGAAGTGGTTTGAGCGTTTTCCCCAGTATAAAGGAAGGGACTTTTTTATCACTGGCGAAAGCTATGCAGGGCATTATGTTCCTCAACTTAGCCAAGTTATCATGAAGTACAACTCAGAAGCAAAGGAAAATACTATAAATCTGAAAGGTTGCATGGTTGGAAATGCTCTTACTGATGATTTCCATGATCATTTGGGGGTTGCCCAGTTTTTGTGGTCAAGTGGTTTGATTTCTGATCAAACATACAAGCTATTGAACCAATGTGATTCTGATTCATTCATACATCCCTCAGATTCATGTGGTATAATTTTTGAAAATGCTGATGCAGAACTTGGTAACATTGACCCCTACAGTATCTTTACTTCTCTATGCCCTGGTAATGTCAGCCAGTCAAAGCAGCTGCTAAGAAGAAAGCATAGATTTGGCAGACTCAGTGAAGGATATGATCCTTGCACAGAGAAGCACTCTACTGTGTACTTCAATCTACCTGAGGTCCAAAATGCGCTTCATGTTGATCCAGCTCATAAGCCTGACAAATGGGCTACCTGCAGTGAAGAGGTAAATGTCAACTGGAAGGATTCTCCAAGTACAGTGCTCGATGTTTATCATGAACTTATTCATTTGGGACTGAGGATATGGATGTTCAGTGGTGACACAGATTCCGTAATCCCAGTGACATCTACTCGCTATAGTATTGATGCTCTTGAACTTCCAACTGTGAGCGCTTGGCGTGCATGGTATGATGAAGGGCAGGTGGGAGGGTGGACACAAGAATATGCTGGACTCACCTTTGTGGCAGTAAGGGGAGCAGGACATGAAGTTCCTCTGCATAGACCAAAACTTGCTCTTGCACTCATCAAAGCCTTCCTAGCTGGGTCCTCCATGCCCAATCTGAAGCTAGTCAGTGCCTCTTGA 1416 0.44 MARPRLSLLAHFVTTLLVIISFASSSSFNNPFVQQNLDRVGVLPGQTFNVNFQHYSGYVTVNDQAGRALFYWFIEADPEAQPKPLVLWLNGGPGCSSIAYGEAEEIGPFHINPDGKSIYLNPYSWNQFANILFLESPVGVGFSYSNTSSDILNNGDKSTAEDSLTFLLKWFERFPQYKGRDFFITGESYAGHYVPQLSQVIMKYNSEAKENTINLKGCMVGNALTDDFHDHLGVAQFLWSSGLISDQTYKLLNQCDSDSFIHPSDSCGIIFENADAELGNIDPYSIFTSLCPGNVSQSKQLLRRKHRFGRLSEGYDPCTEKHSTVYFNLPEVQNALHVDPAHKPDKWATCSEEVNVNWKDSPSTVLDVYHELIHLGLRIWMFSGDTDSVIPVTSTRYSIDALELPTVSAWRAWYDEGQVGGWTQEYAGLTFVAVRGAGHEVPLHRPKLALALIKAFLAGSSMPNLKLVSAS* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2164 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 134 144 IPR001563 GO:0004185|GO:0006508
Dod05g2164 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 429 442 IPR001563 GO:0004185|GO:0006508
Dod05g2164 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 170 195 IPR001563 GO:0004185|GO:0006508
Dod05g2164 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 121 133 IPR001563 GO:0004185|GO:0006508
Dod05g2164 471 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 14 465 IPR001563 GO:0004185|GO:0006508
Dod05g2164 471 Gene3D - 365 459 - -
Dod05g2164 471 ProSitePatterns Serine carboxypeptidases, serine active site. 184 191 IPR018202 GO:0004185
Dod05g2164 471 Pfam Serine carboxypeptidase 44 458 IPR001563 GO:0004185|GO:0006508
Dod05g2164 471 Gene3D - 318 356 - -
Dod05g2164 471 Gene3D alpha/beta hydrolase 35 292 IPR029058 -
Dod05g2164 471 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 29 14 465 - -
Dod05g2164 471 ProSitePatterns Serine carboxypeptidases, histidine active site. 429 446 IPR033124 GO:0004185
Dod05g2164 471 SUPERFAMILY alpha/beta-Hydrolases 39 462 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2164 Dod-Chr5 47417665 47421656 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2164 328 462 Calmodulin-binding Proteins AT2G22960 25.000 6.11e-10 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2164 K16297 - fve:101295740 714.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2164 05 47417665 47421656 Dod05g2164 05 47417665 47421656 ECH