Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2159 ATGGATATGTACATTCGTGTTAAGCGTAGTAAGACGACGTACTTCATCCGGTGCAATCCATCTGATAAGATTGTTGACATAAAGCAAAAGTTGCAAGAACTCGTTGATCAACCGGCTAATAATCAACGCTTAATAATACCTGGTACAGGCCAAGTGTTAGAAGATTCTAGAACACTCGCGGATCAGAAGGTTGAAAATGATGCTGTTGTGGCTCTGACCTTGAGGAAAGATGATAATGAGTTTGAGGAGGTCAACATTGTCCAACCAAATGATTTCTACCAGTCACGGGATGCGGATGGTGCCAACTGGTAA 312 0.4231 MDMYIRVKRSKTTYFIRCNPSDKIVDIKQKLQELVDQPANNQRLIIPGTGQVLEDSRTLADQKVENDAVVALTLRKDDNEFEEVNIVQPNDFYQSRDADGANW* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2159 103 Gene3D - 1 92 - -
Dod05g2159 103 CDD Ubl_ubiquitin_like 5 72 - -
Dod05g2159 103 SMART ubq_7 3 75 IPR000626 GO:0005515
Dod05g2159 103 ProSiteProfiles Ubiquitin domain profile. 1 79 IPR000626 GO:0005515
Dod05g2159 103 Pfam Ubiquitin family 5 76 IPR000626 GO:0005515
Dod05g2159 103 PANTHER OS03G0364000 PROTEIN 1 100 - -
Dod05g2159 103 SUPERFAMILY Ubiquitin-like 1 79 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2159 Dod-Chr5 47382315 47384941 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2159 1 75 Cytoplasmic Ribosomal Protein Gene Family AT1G23410 34.667 4.91e-07 43.5