Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2153 ATGCAGCAAGGTGATCAGACGGTGATTAGCTTGAGGCCTGGTGGTGGTCGTGGCGGCGGCGCCGGCGGAAGCAGGTTCCTTGCTCCTCGATTCGACTCCTCCTCCTCGTCGGCGACTGCGGCGGCGTCTTCTGCTTCCCCTGTTTTCGGCGATCTCCCTCTCCTCCGCCCCCATGGCGGCGCTCCTCCTCCATTCTCCATCAAGGCTGGAGATTCACGGTTTGAGGGCCGTGAGCGGGTGCGATATAACAGAGATCAGCTTTTACAGCTTAGAGAGGCTGTCGAGGTCCTCGATGATGTTCTGAAGATCAAACAAGATATTGAAGCTGAACTTTTTGGTGAAGATCAGAATTGGGGCCGTGCAGAGAACAATCCCCCACCTCAATTTCAAAATCGATATTCTGAGCCAGATAACCGTGACTGGCGTGGTCGATCTGGGCAGCTTCCTTCTAATGCAGATGAGAGGTCTTGGGACAATCTTAGGGAGAATAGGGACTTTGGCAATACTAGTCAGGTTAATCGCCAAGATCAACTGAGTTCACAGTTTGCAAGGGCACAAATCTCATCTAACCAAGGGGGAGGACCTACTCCTACTTTAGTCAAGGCTGAGGTGCCATGGTCAGCTAGAAGGGGAAGTCTCTCTGAAAAGGATCGTGTCTTGAAGACTGTTAAAGGAATTCTAAATAAGTTGACTCCTGAGAAGTTTGATCTTCTGAAGGGTCAGTTGATTGATGCTGGCATAACATCAGCTGACATACTGAAGGAAGTCATTTCGCTCATATTTGATAAGGCAGTGCTAGAACCAACATTTTGTCCGATGTATGCTCTGCTGTGTTCTAATCTTAATGAAAACCTGCCTGTATTCCCATCTGAAGATCCTGAAGGGAAAGAAATCACTTTTAAGCGAGTACTCTTGAATATCTGCCAGGAGGCGTTTGAAGGTGCTGATAAACTGAGGGAAGAGGTTAGGCAAATGTCTACCCCTGATCAGGAGATGGAGCGACGTGATAAGGAAAGACTTGTCAAGCTTCGCACCCTCGGAAACATCCGTTTAATTGGAGAGCTGTTGAAGCAAAAAATGGTTCCAGAAAAGATTGTGCATCACATTGTTCAGGAGCTTTTAGGACCTCCTGACAGCAAGGTCTGTCCAGCTGAGGAAAATGTTGAAGCCATATGTCAATTTTTTAACACTATTGGTAAGCAGCTTGATGAAAGTCCAAAATCACGACGTATAAACGATATCTACTTTGGCCGGCTGAGAGAGCTGAGCATAAACTCCCAACTTGCACCACGGCTCAAGTTCATGGTTCGTGACGTTATAGAGTTGCGTGCTAATAACTGGGTTCCGAGGCGTGAAGAGGTGAAAGCCAAAACCATTACTGAAATTCATTCGGAGGCAGAAAAGAATCTTGGATTGCGTCCAGGTGCCACTGCTAGTATCAGAAATCCCCGTGGTGTAGTTTCTGGTGTTCAAGGAAATACCAGCACTGGGGGCTTCCCCATTGCTCGACCTGGTACAGGTGGTTTGATGCCTGGGATGCCTGGGACAAGGAAGATGCCTGGGATGCCTGGAATAGATAATGACAACTGGGAGATGCCTAGGACTAGAGCAATGCCAAGAGGTGATGTTTCAGGCATGCAAACTGCCGGACGTGGACAGTCTCCTTTGTTTTCCAAGTCATCAACTCTGAGCTCAAAGTTTCTACCCCAAGGCAGTGGTGGTCTTATAAGTGGGAGGAATAGTGCCCTATTGCATGGAGGTGGTGCCCCTCCTGCTCGTCCAACAAACTTTGAGCCTGCACCTCAAATCCCTTCACCTGTCAAAGCTGCTCCTGCTGTGTCCTCCGAGAAGCCACAGGCTCCAGTTGCAAAATTGAATACTGCCGACCTTCGCCGCAAAACTGTTTCTCTTTTGGAAGAATATTTCAGTGTTCGCCTCTTGGATGAGGCATTACAGTGTGTGGAGGAGCTAAAATCTCCAGCTTACCACCCTGAGGTTGTCAAGGAAGCCATTGCCCTTGCACTAGATAAAAGTCCGCCATGTGTTGAACCTGTCGCCAATCTCCTCGAGTACCTGTTGATTAAGAAGGTTCTTTCAGCTAGAGACATAGGGACTGGCTGTCTGCTATTTGGTTCTATGCTGGATGATATTGGTATAGATTTACCCAAAGCACCAAACAATTTTGGTGAGATAATAGGGAAACTAATTTTGGCCGGGGGTTTGGATTTTAAGGTGGTGGGAGAAATCCTTGAGAAGGTGGAGGATGACCGGTTCCAGAAAGCAATATTTGACTCTGCTGTACAAGTGATCATCTCTGCATCTGGGCAAGCTGTGCTGGATTCACAGGCATCTGATGTTGAGGCCTGCCAGAGTCTGTTCAAGTGA 2385 0.4809 MQQGDQTVISLRPGGGRGGGAGGSRFLAPRFDSSSSSATAAASSASPVFGDLPLLRPHGGAPPPFSIKAGDSRFEGRERVRYNRDQLLQLREAVEVLDDVLKIKQDIEAELFGEDQNWGRAENNPPPQFQNRYSEPDNRDWRGRSGQLPSNADERSWDNLRENRDFGNTSQVNRQDQLSSQFARAQISSNQGGGPTPTLVKAEVPWSARRGSLSEKDRVLKTVKGILNKLTPEKFDLLKGQLIDAGITSADILKEVISLIFDKAVLEPTFCPMYALLCSNLNENLPVFPSEDPEGKEITFKRVLLNICQEAFEGADKLREEVRQMSTPDQEMERRDKERLVKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGPPDSKVCPAEENVEAICQFFNTIGKQLDESPKSRRINDIYFGRLRELSINSQLAPRLKFMVRDVIELRANNWVPRREEVKAKTITEIHSEAEKNLGLRPGATASIRNPRGVVSGVQGNTSTGGFPIARPGTGGLMPGMPGTRKMPGMPGIDNDNWEMPRTRAMPRGDVSGMQTAGRGQSPLFSKSSTLSSKFLPQGSGGLISGRNSALLHGGGAPPARPTNFEPAPQIPSPVKAAPAVSSEKPQAPVAKLNTADLRRKTVSLLEEYFSVRLLDEALQCVEELKSPAYHPEVVKEAIALALDKSPPCVEPVANLLEYLLIKKVLSARDIGTGCLLFGSMLDDIGIDLPKAPNNFGEIIGKLILAGGLDFKVVGEILEKVEDDRFQKAIFDSAVQVIISASGQAVLDSQASDVEACQSLFK* 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2153 794 MobiDBLite consensus disorder prediction 546 574 - -
Dod05g2153 794 Pfam MA3 domain 630 742 IPR003891 -
Dod05g2153 794 Gene3D - 623 790 - -
Dod05g2153 794 SMART ma3_7 630 742 IPR003891 -
Dod05g2153 794 SMART if4_15 220 446 IPR003890 GO:0003723|GO:0005515
Dod05g2153 794 MobiDBLite consensus disorder prediction 29 44 - -
Dod05g2153 794 MobiDBLite consensus disorder prediction 116 199 - -
Dod05g2153 794 MobiDBLite consensus disorder prediction 163 196 - -
Dod05g2153 794 ProSiteProfiles MI domain profile. 629 751 IPR003891 -
Dod05g2153 794 MobiDBLite consensus disorder prediction 547 574 - -
Dod05g2153 794 SUPERFAMILY ARM repeat 214 449 IPR016024 -
Dod05g2153 794 MobiDBLite consensus disorder prediction 1 45 - -
Dod05g2153 794 PANTHER MIF4G DOMAIN-CONTAINING PROTEIN / MA3 DOMAIN-CONTAINING PROTEIN ISOFORM 2 3 793 - -
Dod05g2153 794 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 3 793 IPR045208 GO:0003743
Dod05g2153 794 MobiDBLite consensus disorder prediction 484 500 - -
Dod05g2153 794 SUPERFAMILY ARM repeat 625 774 IPR016024 -
Dod05g2153 794 MobiDBLite consensus disorder prediction 475 506 - -
Dod05g2153 794 Gene3D - 211 447 - -
Dod05g2153 794 Pfam MIF4G domain 220 446 IPR003890 GO:0003723|GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2153 Dod-Chr5 47317776 47323260 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2153 1 792 Eukaryotic Initiation Factors Gene Family AT5G57870 64.743 0.0 982
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2153 K03260 - gmx:100781275 1292.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2153 05 47317776 47323260 Dod05g2153 05 47317776 47323260 ECH