Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2144 ATGATGATGGCATTCCAAAGCAAGAAGGTCCATCTCTTCTGCTTCCTGTGCATATTATTTATGTTTGCAGTTTCATCCATTGTTGCTGCCGTTGGTGTGCCAAAAGAGATAGAGCAAGAGCAAGATCGAATTACAGGGCTCCCGGGGCAGCCACGTGTGGCATTCTCTCAGTTCTCCGGCTATGTCACTGTCAACCAGCTTCATGGCCGGGCACTCTTCTACTGGCTTACTGAGGCCCCTACTTCCTCCCACAATAAGCCTCTTGTTCTCTGGCTCAATGGAGGGCCGGGTTGCTCATCGGTTGCATATGGGGCATCAGAGGAAATTGGGCCATTCCGGATAAACAGCACTGGCACTTCCTTATATCTTAACAAATATGCATGGAACAAAGAAGCAAATATTCTCTTTCTTGAATCACCTGCTGGTGTTGGTTTCTCATACACAAATACAAGCTCCGATCTCCTAACTTCCGGGGACAAAAGGACAGCTCAGGATGCTCTCATTTTTCTAATTAGATGGATGTCAAGATTTCCACAATATAAATATAGGGACTTTTACATTGCTGGTGAGAGCTACGCAGGACATTACGTGCCCCAGTTGGCTAAGAAAATCCATGATTATAATAAAAACCATTCCAACATCATAAATCTCAAAGGGTTCATGGTGGGAAATGGTGTGACTGATAACTACTATGATGGGATTGGAACTGTCACGTATTGGTGGAGCCATTCTATGATATCTGATCAGTCACACAAAGCTATCCTCAAACACTGCGATTTCACCGCAGAACAAACATCTAAATCATGTGATGATGCTGTGAATTATGCTGTTAATCACGAATTTGGAAACATTGATCAATACAGTATATATACCCCAACGTGCCCAACGTCACAGAACAACACTCTCAGGCGCATAAGGCTCAAGAGTACAATTTTTCATATGATTTCTGGATATGATCCTTGCACTGAAAATTATGCGGAGAAATATTATAATCTTCCTGAGGTGCAGAAAGCAATGCATGCAAATGTTACAAGCATTCCTTACAATTGGACTGCTTGCAGTGATGTGCTACTGAAGAACTGGAAGGATTCTGAGGTTTCTATATTGCCCATATACAAAGAGTTAATTGCCGCTGGATTGAGAATATGGGTCTTCAGCGGGGACACAGATTCGGTGGTTCCAGTTACTGCCACAAAGTTTTCTCTAAACCATCTCAACCTCACCATCAAAACACGTTGGTATCCATGGTACTCGAGTGGACGGCAGGTGGGTGGATGGACAGAGGTATACGAGGGACTAACTTTTGCAACAGTGAGAGGAGCTGGACATGAAGTACCACTGTTTCAGCCAGAGCGAGCTCACATACTTTTCAAGTCCTTTCTGGCAGGGAAGGAGCTTCCAAAATCTTGA 1410 0.439 MMMAFQSKKVHLFCFLCILFMFAVSSIVAAVGVPKEIEQEQDRITGLPGQPRVAFSQFSGYVTVNQLHGRALFYWLTEAPTSSHNKPLVLWLNGGPGCSSVAYGASEEIGPFRINSTGTSLYLNKYAWNKEANILFLESPAGVGFSYTNTSSDLLTSGDKRTAQDALIFLIRWMSRFPQYKYRDFYIAGESYAGHYVPQLAKKIHDYNKNHSNIINLKGFMVGNGVTDNYYDGIGTVTYWWSHSMISDQSHKAILKHCDFTAEQTSKSCDDAVNYAVNHEFGNIDQYSIYTPTCPTSQNNTLRRIRLKSTIFHMISGYDPCTENYAEKYYNLPEVQKAMHANVTSIPYNWTACSDVLLKNWKDSEVSILPIYKELIAAGLRIWVFSGDTDSVVPVTATKFSLNHLNLTIKTRWYPWYSSGRQVGGWTEVYEGLTFATVRGAGHEVPLFQPERAHILFKSFLAGKELPKS* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2144 469 ProSitePatterns Serine carboxypeptidases, histidine active site. 433 450 IPR033124 GO:0004185
Dod05g2144 469 Gene3D - 321 358 - -
Dod05g2144 469 SUPERFAMILY alpha/beta-Hydrolases 39 467 IPR029058 -
Dod05g2144 469 Gene3D alpha/beta hydrolase 38 296 IPR029058 -
Dod05g2144 469 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 21 468 IPR001563 GO:0004185|GO:0006508
Dod05g2144 469 Gene3D - 368 463 - -
Dod05g2144 469 PANTHER SERINE CARBOXYPEPTIDASE 24 21 468 - -
Dod05g2144 469 Pfam Serine carboxypeptidase 49 462 IPR001563 GO:0004185|GO:0006508
Dod05g2144 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 137 147 IPR001563 GO:0004185|GO:0006508
Dod05g2144 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 136 IPR001563 GO:0004185|GO:0006508
Dod05g2144 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 433 446 IPR001563 GO:0004185|GO:0006508
Dod05g2144 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 173 198 IPR001563 GO:0004185|GO:0006508
Dod05g2144 469 ProSitePatterns Serine carboxypeptidases, serine active site. 187 194 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2144 Dod-Chr5 47257017 47261780 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2144 326 466 Calmodulin-binding Proteins AT2G22960 29.577 1.32e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2144 K16297 - gmx:100783242 810.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2144 05 47257017 47261780 Dod05g2144 05 47257017 47261780 ECH