Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2142 ATGGCTTCCATACCAATTGCATCTCTTCCATTCTTAATCATGATCTCAATAGTAATGTTGCTGCTAACATCCTGCTCTGAAGCACGAGAGTTTCTGGTTGGAGGCAGTGAAGATTCCTGGAAGGTTCCACTTCCATCACCTGATTCTCTCAACCAGTGGGCCAACACTCAGCACTTCACCATCGGCGATGCTCTCATCTTTAAGTACGATAACAAGACAGAATCGGTGCACTTAGTGAATGAGAGGGACTACTCAGTTTGCAATCCGGTGGGGCATGGGAAACACAAGGTATTCAACGACGGCAATACCAAGGTGTTTTTAAGGAGTTCAGGGACAGTTCACTTCATAAGTGGAGACAAGGGCCATTGCCTGATGGGTTTAAAGCTGGCTGTGGTGGTTATGTCACAGTCTAGCAGACACCACGGAGCAAGTTCTCATTCACCATCACCGTCACCGTCACCGTCACCGTCACCGCATGCACTGGCATCAACCAATCAAGGAGTTGCTGGCACTTCACACGGTGGATTAATCAGAGTTATGATGGGGTTGGGGGTTTCATTCCTGATGATAGTGTTCTTCATTATTTGA 588 0.4728 MASIPIASLPFLIMISIVMLLLTSCSEAREFLVGGSEDSWKVPLPSPDSLNQWANTQHFTIGDALIFKYDNKTESVHLVNERDYSVCNPVGHGKHKVFNDGNTKVFLRSSGTVHFISGDKGHCLMGLKLAVVVMSQSSRHHGASSHSPSPSPSPSPSPHALASTNQGVAGTSHGGLIRVMMGLGVSFLMIVFFII* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2142 195 Gene3D - 27 140 IPR008972 -
Dod05g2142 195 SUPERFAMILY Cupredoxins 28 134 IPR008972 -
Dod05g2142 195 PANTHER BLUE COPPER PROTEIN 14 188 IPR039391 GO:0009055
Dod05g2142 195 PANTHER EARLY NODULIN-55-2 14 188 - -
Dod05g2142 195 ProSiteProfiles Phytocyanin domain profile. 29 135 IPR003245 GO:0009055
Dod05g2142 195 Pfam Plastocyanin-like domain 40 126 IPR003245 GO:0009055
Dod05g2142 195 MobiDBLite consensus disorder prediction 139 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2142 Dod-Chr5 47242834 47244226 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2142 6 150 Phytocyanin Superfamily AT5G57920 37.838 1.05e-28 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2142 - - gmx:100784860 169.474