Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2130 ATGGGTCTGGGAGTCTTTGGTTCTTTTCTGGTTTTGACACTCTTGGTCAAGCAGTTGGCCTCTCAGCAACCAAACACTGATGAGTTCTATGTGTCTGAGTTCTTGAAGAAGATGGGTTTAGCAGACTCCCAAGCCTACAACTTCTCAGCTTCTGTTTGTTCATGGCCAGGAGTTTTCTGTGATCCCAACAAGGAACATGTTGTTGAGTTAAATGTTTCTGGAATGAGCCTCTCTGGCCTTATTCCTGATGACACAGTAGGCAAGCTCTGCAAGCTTCAATCCTTGGATCTTAGCTACAACAAAATCACTGGCTTGCCTTCTGATTTCTGGAGTTTGAGCTCTCTCAAGAGCCTCAACCTCTCCTCCAATCAGATTTCTGGTTCATTGACCAGCAATATTGGCAACTTTGGTATGCTAGAAACCATTGACTTGTCCAGCAACAATTTCACTGAGGAAATTCCTGATGCTATTAGCTCCCTTGTGAGTCTGAGGGTCCTCAAACTTGACCACAACAGGTTTGCAAATAGCATGCCTTCTGGGATTCTAAAGTGTCAGTCCCTATTTTCAGTTGATCTTTCATCAAATCAGCTGAGTGGAACTCTTCCGGATGGTTTTGGTGCCGCTTTTCCTAAGCTCAGGAACTTGAACCTTGCTGGGAATAACATTGATGGCCGTGTCTCAGATATTTCTGGGTTAAAGTCCATTGTGAGTATCAACATATCAGGCAATTCCTTTCAGGGTTCTGTCATGGGTGTGTTTCAGGAAGGTTTGGAGGTGGTGGACCTAAGCAGAAACCAATTTCAAGGCCACATTTCTCAGGTACAATACAGCACTAATTACAATTGGTCTCATTTAGTTTATCTTGATTTGTCAGAGAATCAGCTAAGTGGGGAGATTTTCCAAAACTTGAATGAGTCCTTGAATCTTAAGCACCTTAATCTTGCAAACAATAGATTTTCCAGGCAGATATTCCCACAGATTGAAATGCTCCCAGGATTGGAATATCTGAACTTGTCCAAAACAAATCTTGTTGGTCTCATCCCTGATGAAATCTCACAAATGAGTAATTTGAATGCACTTGATCTTTCTATGAATCATCTTACTGGGAGAATTCCCTTACTGAGGAATAAACAGCTCCAAGTTCTTGACCTTTCAAACAACAATTTGAGTGGAGCAATACCCCCATCTGTCTTGGAAAAACTACCATGGATGGAGAAATACAACTTCTCTTATAATAACTTGACACTATGTGCTTCAGACATCCACTCTGATGTCCTTCAGTCAGCATTCTTTGGATCAGTGGACAGTTGTCCAATTGCTGCAGACCCTCATCTTTTCAAAAGAAGAGCCAATGGACACAGAGGAATGAAGCTTGCTCTGGTGTTGACCTTCTCAATGGTGTGCTTGCTTGCTGGGCTTTTGTTTCTAGCATTTGGTTGCAGAAGGAAAACAAAGATGTGGGAAGTTAAGCAAACTTCATGCAAAGAAGAACAGAATATTTCAGGCCCCTTTTCATTCCAAACTGATTCAACAACCTGGGTGGCTGATGTTAAGCAAGCAACATCAGTCCCAGTAGTAATATTTGAGAAGCCATTGTTGAACATTACATTTGCAGACCTCTTAGCTGCAACTTCAAATTTCGATCGTGGTACCCTTTTGGCTGAAGGAAAATTTGGTCCAGTTTATAGAGGCTTTCTGCCTGGTGGTATTCATGTAGCAGTTAAAGTTCTGGTGGTTGGTTCTACATTGACAGATCAAGAAGCTGCAAGAGAGCTCGAATTTCTTGGTCGAATCAAGCACCCCAACCTTGTTCCTTTAACCGGATATTGTGTTGCTGGGGATCAAAGGATTGCCATATATGATTACATGGAGAATGGTAACTTGCAAAATCTGCTTTATGACTTGCCACTTGGGGTGCAAAGCACAGATGATTGGAGCACAGACACATGGGATGAAGCTGACAACAATGGAATCCAAAATGCTGGCTCTGAAGGTTTGCTCACAGCCTGGAGATTTCGCCACAAGATCGCTCTTGGCACCGCCCGAGCATTGGCATTCCTGCATCATGGATGCTCACCTCCAATCATCCATAGAGCTGTCAAAGCCAGCAGTGTTTATTTGGACTATGACTTGGAGCCAAGGTTGTCTGATTTTGGGCTGGCTAAGATCTTTGGAAGTGGCTTGGATGAGGAGATTGGGCACGGTTCACCTGGTTATGTTCCACCAGAGTTTTCTCAACCTGAATTTGACTCCCCAACACCAAAATCTGATGTGTACTGTTTTGGGGTTGTTCTGTTTGAGCTAGTAACTGGTAAGAAGCCAGTTGGAGATGATTACCCTGATGATAAGGAAGCAACTTTGGTGAGTTGGGTCAGAGGACTAGTTAGAAAGAACCACGTTTCAAGAGCTATTGATCCAAAGATTCGTGATACCGGACCGGATGAACAAATGGAGGAGGCTCTTAAGATTGGTTATCTATGCACTGCTGACTTACCCTCCAAGCGACCGAGCATGCAGCAGATAGTTGGACTTCTAAAGGACATTGAACCTACGACTAATTAG 2562 0.4325 MGLGVFGSFLVLTLLVKQLASQQPNTDEFYVSEFLKKMGLADSQAYNFSASVCSWPGVFCDPNKEHVVELNVSGMSLSGLIPDDTVGKLCKLQSLDLSYNKITGLPSDFWSLSSLKSLNLSSNQISGSLTSNIGNFGMLETIDLSSNNFTEEIPDAISSLVSLRVLKLDHNRFANSMPSGILKCQSLFSVDLSSNQLSGTLPDGFGAAFPKLRNLNLAGNNIDGRVSDISGLKSIVSINISGNSFQGSVMGVFQEGLEVVDLSRNQFQGHISQVQYSTNYNWSHLVYLDLSENQLSGEIFQNLNESLNLKHLNLANNRFSRQIFPQIEMLPGLEYLNLSKTNLVGLIPDEISQMSNLNALDLSMNHLTGRIPLLRNKQLQVLDLSNNNLSGAIPPSVLEKLPWMEKYNFSYNNLTLCASDIHSDVLQSAFFGSVDSCPIAADPHLFKRRANGHRGMKLALVLTFSMVCLLAGLLFLAFGCRRKTKMWEVKQTSCKEEQNISGPFSFQTDSTTWVADVKQATSVPVVIFEKPLLNITFADLLAATSNFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVVGSTLTDQEAARELEFLGRIKHPNLVPLTGYCVAGDQRIAIYDYMENGNLQNLLYDLPLGVQSTDDWSTDTWDEADNNGIQNAGSEGLLTAWRFRHKIALGTARALAFLHHGCSPPIIHRAVKASSVYLDYDLEPRLSDFGLAKIFGSGLDEEIGHGSPGYVPPEFSQPEFDSPTPKSDVYCFGVVLFELVTGKKPVGDDYPDDKEATLVSWVRGLVRKNHVSRAIDPKIRDTGPDEQMEEALKIGYLCTADLPSKRPSMQQIVGLLKDIEPTTN* 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2130 853 Pfam Leucine Rich repeat 283 298 IPR001611 GO:0005515
Dod05g2130 853 ProSiteProfiles Leucine-rich repeat profile. 91 112 IPR001611 GO:0005515
Dod05g2130 853 SMART LRR_typ_2 160 184 IPR003591 -
Dod05g2130 853 SMART LRR_typ_2 377 400 IPR003591 -
Dod05g2130 853 SMART LRR_typ_2 112 136 IPR003591 -
Dod05g2130 853 SMART LRR_typ_2 89 111 IPR003591 -
Dod05g2130 853 SMART LRR_typ_2 330 354 IPR003591 -
Dod05g2130 853 SUPERFAMILY Protein kinase-like (PK-like) 524 845 IPR011009 -
Dod05g2130 853 PRINTS Leucine-rich repeat signature 92 105 - -
Dod05g2130 853 PRINTS Leucine-rich repeat signature 112 125 - -
Dod05g2130 853 PANTHER CONCANAVALIN A-LIKE LECTIN/GLUCANASE DOMAIN-CONTAINING PROTEIN-RELATED 1 850 - -
Dod05g2130 853 Gene3D Ribonuclease Inhibitor 376 424 IPR032675 -
Dod05g2130 853 Pfam Leucine Rich Repeat 378 397 IPR001611 GO:0005515
Dod05g2130 853 Gene3D Phosphorylase Kinase; domain 1 507 622 - -
Dod05g2130 853 Gene3D Transferase(Phosphotransferase) domain 1 623 853 - -
Dod05g2130 853 Pfam Protein tyrosine and serine/threonine kinase 551 844 IPR001245 GO:0004672|GO:0006468
Dod05g2130 853 ProSiteProfiles Protein kinase domain profile. 547 852 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g2130 853 ProSiteProfiles Leucine-rich repeat profile. 211 233 IPR001611 GO:0005515
Dod05g2130 853 Gene3D Ribonuclease Inhibitor 30 277 IPR032675 -
Dod05g2130 853 Gene3D Ribonuclease Inhibitor 278 375 IPR032675 -
Dod05g2130 853 SUPERFAMILY L domain-like 47 417 - -
Dod05g2130 853 Pfam Leucine rich repeat 69 125 IPR001611 GO:0005515
Dod05g2130 853 Pfam Leucine rich repeat 308 367 IPR001611 GO:0005515
Dod05g2130 853 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 1 850 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2130 Dod-Chr5 47163368 47166929 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2130 69 848 Receptor kinase-like Gene Family AT5G07280 32.972 6.96e-116 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Dod05g2130 PK_Tyr_Ser-Thr 7.5e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2130 - - gmx:100787157 1451.8