Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2125 ATGGCTATGCTCCGAAAATTGTTCTTCCGAAAACCCCCTGATGGCCTTCTCGAGATCTGTGAGAGAGTTTATGTATTTGATTGTTGCTTCACCACGGATGCTTGGAATGAAGAGAATTACAAAGTGTACATTGATGGTATAGTTGGTCAGCTTCGTGAGAATTTGCCTGATGCTTCAATTTTGGTCTTCAATTTCCGTGAGGAAGAGACCAAGAGTCTTATGGCTAACATCTTGTCTGAGTATGATATTACTATAATGGACTATCCAAGGCACTATGAGGGTTGCCCTGTGCTCAAGATGGAGCTCATTCACCACTTTCTAAGGTCTGGTGAGAGTTGGCTTTCTCTTGGGCAACACAATGTGCTGCTGATGCATTGTGAACGTGGGGGTTGGCCTGTTTTGGCTTTCATGCTGGCAGCATTGTTGATTTATAGGAAGCTTTATACTGGGGAGCAGAGGACTTTGGATATGGTTTATAGGCAGGCACCCCGCGAGCTTTTGCAGTTGTTGACGCCGTTGAATCCAATGCCTTCGCAGCTGAGGTATCTGCAGTATGTTTCCAGGAGGAATGTGGCCATAGATTGGCCTCCGTTGGACAGGGCACTCATGTTGGACTGCATCATTCTTAGATTTATACCGAACTTTGATGGGGAAGGTGGTTGTCATCCCTTGTTTAGGATTTATGGACAGGATCCTTTCAGTGCAGACAAGAATCCAAAGATGTTGTACTCGACACCGAAGAGAAGCAAGAGTGTCCGGTCTTACAAGCAGGGAGAGACAGAACTAATTAAAATTGATATCAATTGCCATATTCAAGGTGATGTTGTGATTGAGAGCATTAACTTGAATGGTGATATGGAGCATGAAATGATGATGTTCCGAGTAATGTTCAACACGGCTTTTGTTAGATCTAATATTCTGATGCTGAATCGGGATGAAATTGACATTTTATGGGATGTTAAAGATCACTTTCCAAAGGATTTCAGAGCAGAGATCCTTTTCTCAGAGATGGCTGCTGCTGCAGCAGTTATTGCGGATGGTGTCTCATGCTTTGAGGAGAAGGAGGGACTGCCAGTGGAAGCATTTGCAAAGGTTCAAGATTTCTTTAGCCACGTGGATTGGATGAACCCCAAGGCAGATGCTGCACTAAATGTACTTCAACAAATGACTGCTACAGCTATCATGAATGACAGGTTGGATACAGTTTCTGATAAGTATGCGGAATCTGGTGCTTCATTGCATGAAATGGCCCCTACAATGCCTCAGGGGAAAATGAATAAAGTGATGGAGTCTTTGCCCTCAATCAAGCAATCTCCAGAAAATGATGTGAGTAGAAAAGATGATATCAGCAACAAAGTTGATGCTACTCCGCAGCAGTGTAGTACTTCTGACATAGTCTGCCAAGACACACCTAGCACTCCTGAAAAAAACTTGGAGTCCAGTAAATGTCTTACAAGTTCGGCAAATCTTGACAGAAAACCACAGGCATCTGATGTTGCTTTACCTGCTTCTGAGGATACTTCTCTTTCCCCACATACGCCTCGACAGCCTTTGTCAACTAGTGCTAAAGGAGTTCATGATTCTCCTCTCGACATGGAATCACCTGATCATCATCTTTTGCCTTTAAAATCAAGACAACCTGTTATTGATACTGAAGCTCAATTACAAGACAGAAGGCAGTCATCTATTTCCAGCTCTGCACCTGAGAGTCAATCCTCATCTACTTTTCATAGTACATCACCAAATGATGCTATTTCCAATCCTTCAGCTTCAGCAGTTGCTTCAATTCAGCCACCCCCTTCACTCTCTTCCATAACACCTGGGAAGGAGATTCCCCCTCTTAGAACAAGACCTGAGTCATCTCCTTCAAAACCTCCAACTCCACCTCCTCCTCCTACTCCTCCACTAAGGGATCGTAAACCAGCTAGAGCCGGACCTCCTCCACCTCCACCACCACCTCCTCCAAAGAACGAACTACATGTTAGAACTGGTCCTCCTTTGCCTTCGCCACCTCCTCCAAAGAATGAACTGCATGTTAGAACTGGACCTCCATCGCCTCCTCCACCTCCTATGAAGGAGGGGCCACATGTTAGAGCTGGACCCCTTCCTCCACCTCCTCCTCCTCTAAAAGAAGAGCAACCCATTAGAATTAAGCCTCCTCCACCGCCGCCACCTCCTCGTTCATCTGGTAAAGTTGAAGGTTCTAGTATAGCACCACGGCCACCACCACCGCCACTTCCATTTGCAACAGTTTCCTCGAATCAACCTAATCCTTCATTGCATAAATCTTCACCTCCTCCTGCAGCACCAGCTGCCCCACCACCTCCAGTTCCCTTTGGCAAAGGAGGTCTACAACCAGGCAATGCTTCTCTAGGGTCTTTTTCTGGGGTTGGTGATGGAAATAGTCTGTCAGGTGCGACACCCAACAGCTTGAAGGGACGAATTCTATCACGGACCATTAGTTCAAAGAACAACACTAAAAAGTTGAAGCCATTGCATTGGTTGAAACTATCTAGAGCAGTGCAAGGAAGTTTGTGGGCTGAGACACAGAAATCGGGTGAAGCTTCCAAAGCCCCAGAGATTGATATTTCAGAGCTTGAGAGTCTCTTCTCAGCAGCAGTCCCAAGTTCAGGCGCTGCCAAGAAGTCAAATGCCCAAGGCTTAGTTGGACCTAAATCTGATAAAGTGCAACTGATTGAGCATAGGAGAGCATACAACTGTGAAATCATGCTTTCAAAAGTGAAGGTGCCATTGCATGATTTAATGAGCTCTGTGCTAGCACTGGAAGAGTCAGCACTTGATATTGATCAGGTTGAGAACCTCATAAAGTTTTGTCCCACAAAAGAGGAGATGGAAGTACTCAAGGGTTATACTGGGGAAAAGGAAAAGCTAGGGAGATGTGAACAGTTCTTCCTGGAGTTGATGAAAGTACCACGGGTAGAATCCAAGCTTAGAGTTTTTTCATTCAAGATTCAGTTCCACACACAGGTTTCTGACCTTAGAAATAGCTTGAATGTTGTGAATGCTGCAGCAGAAGAGATCAGGAATTCTGTCAAATTAAAGAGAATTATGCAAACCATACTTTCTTTGGGAAATGCTTTGAACCAAGGAACTGCCAGGGGTTCGGCCATTGGATTCAGATTGGATAGTCTTCTGAAGCTCACTGAGACACGGGCACAGAACAACAAGATGACTCTCATGCATTATCTTTGTAAGGTGCTGGATGACAAGCTGCCAGAAGTTCTGGACTTCTCCAAGGATCTTGCTAACCTTGAGCCAGCAGCAAAGATCCAATTGAAGGTTCTGGCTGAGGAGATGCAAGCTATAAGCAAAGGCTTAGAGAAAGTTGTACAGGAATTATCGATCTCTGAAAATGATGGTCCTATATCAGAAACTTTCCGCAAGAATTTGATAGGGTTCCTCTCTTCTGCTGAAGCTGAAGTCCGTTCATTGGCTTCACTATATTCTAGTGTGGGCAGGAATGTGGACGCGTTGATTCTTTATTTTGGTGAAGATCCATCCCGGTGCCCATTTGAGCAAGTTGTCACAACCTTGCTCAACTTCACTAGAATGTTCAGCAAAGCACATGAAGAAAACTGCAAGCAGATAGAGCTTGAAATGAAGAAGACGGCAGAAAGTGAGAAAAAGAAATGTGAATCAGAAAAGATATTACCTACGGCAATGCGGACCGGCAATGTCAAATGA 3705 0.4475 MAMLRKLFFRKPPDGLLEICERVYVFDCCFTTDAWNEENYKVYIDGIVGQLRENLPDASILVFNFREEETKSLMANILSEYDITIMDYPRHYEGCPVLKMELIHHFLRSGESWLSLGQHNVLLMHCERGGWPVLAFMLAALLIYRKLYTGEQRTLDMVYRQAPRELLQLLTPLNPMPSQLRYLQYVSRRNVAIDWPPLDRALMLDCIILRFIPNFDGEGGCHPLFRIYGQDPFSADKNPKMLYSTPKRSKSVRSYKQGETELIKIDINCHIQGDVVIESINLNGDMEHEMMMFRVMFNTAFVRSNILMLNRDEIDILWDVKDHFPKDFRAEILFSEMAAAAAVIADGVSCFEEKEGLPVEAFAKVQDFFSHVDWMNPKADAALNVLQQMTATAIMNDRLDTVSDKYAESGASLHEMAPTMPQGKMNKVMESLPSIKQSPENDVSRKDDISNKVDATPQQCSTSDIVCQDTPSTPEKNLESSKCLTSSANLDRKPQASDVALPASEDTSLSPHTPRQPLSTSAKGVHDSPLDMESPDHHLLPLKSRQPVIDTEAQLQDRRQSSISSSAPESQSSSTFHSTSPNDAISNPSASAVASIQPPPSLSSITPGKEIPPLRTRPESSPSKPPTPPPPPTPPLRDRKPARAGPPPPPPPPPPKNELHVRTGPPLPSPPPPKNELHVRTGPPSPPPPPMKEGPHVRAGPLPPPPPPLKEEQPIRIKPPPPPPPPRSSGKVEGSSIAPRPPPPPLPFATVSSNQPNPSLHKSSPPPAAPAAPPPPVPFGKGGLQPGNASLGSFSGVGDGNSLSGATPNSLKGRILSRTISSKNNTKKLKPLHWLKLSRAVQGSLWAETQKSGEASKAPEIDISELESLFSAAVPSSGAAKKSNAQGLVGPKSDKVQLIEHRRAYNCEIMLSKVKVPLHDLMSSVLALEESALDIDQVENLIKFCPTKEEMEVLKGYTGEKEKLGRCEQFFLELMKVPRVESKLRVFSFKIQFHTQVSDLRNSLNVVNAAAEEIRNSVKLKRIMQTILSLGNALNQGTARGSAIGFRLDSLLKLTETRAQNNKMTLMHYLCKVLDDKLPEVLDFSKDLANLEPAAKIQLKVLAEEMQAISKGLEKVVQELSISENDGPISETFRKNLIGFLSSAEAEVRSLASLYSSVGRNVDALILYFGEDPSRCPFEQVVTTLLNFTRMFSKAHEENCKQIELEMKKTAESEKKKCESEKILPTAMRTGNVK* 1235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2125 1234 MobiDBLite consensus disorder prediction 453 493 - -
Dod05g2125 1234 Gene3D Protein tyrosine phosphatase superfamily 15 198 IPR029021 -
Dod05g2125 1234 PANTHER FORMIN-J 705 1220 - -
Dod05g2125 1234 PANTHER FORMIN-J 1 706 - -
Dod05g2125 1234 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 337 IPR035892 -
Dod05g2125 1234 MobiDBLite consensus disorder prediction 760 781 - -
Dod05g2125 1234 SMART it6_source 819 1234 IPR015425 -
Dod05g2125 1234 MobiDBLite consensus disorder prediction 737 751 - -
Dod05g2125 1234 SMART PTEN_C2_2 197 336 IPR014020 -
Dod05g2125 1234 Pfam Formin Homology 2 Domain 823 1193 IPR015425 -
Dod05g2125 1234 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
Dod05g2125 1234 MobiDBLite consensus disorder prediction 434 810 - -
Dod05g2125 1234 MobiDBLite consensus disorder prediction 618 729 - -
Dod05g2125 1234 Coils Coil 1193 1213 - -
Dod05g2125 1234 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 187 IPR029021 -
Dod05g2125 1234 SUPERFAMILY Formin homology 2 domain (FH2 domain) 765 1209 - -
Dod05g2125 1234 MobiDBLite consensus disorder prediction 788 810 - -
Dod05g2125 1234 MobiDBLite consensus disorder prediction 549 604 - -
Dod05g2125 1234 MobiDBLite consensus disorder prediction 501 523 - -
Dod05g2125 1234 ProSiteProfiles Formin homology-2 (FH2) domain profile. 819 1218 IPR015425 -
Dod05g2125 1234 Gene3D Formin, FH2 domain 818 1203 IPR042201 -
Dod05g2125 1234 ProSiteProfiles C2 tensin-type domain profile. 199 337 IPR014020 -
Dod05g2125 1234 Gene3D - 199 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2125 Dod-Chr5 47117013 47126031 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2125 809 1216 Protein tyrosine phosphatase (PTP) family AT5G58160 74.328 0.0 611
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2125 - - aprc:113848377 1779.61