Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2112 ATGTCTATAGGAAGACCTCCATTCCCTCGTCTCCTCCTTAACAATGTCTCTTGCATGAGAGATGCCCAGCAGATTCTGCGTCATGTTAATGTCTCTGTTCATGATGGAGGGGCGCTTGTGCTAAGTGGCGCAAACGGCTCAGGAAAGACAACTTTCCTGCGCATGTTAGCTGGATTTACTCGTCCTTCTGCTGGTGAAATCCTTTGGAATGGCCATAATATTCAAGAATCTGGAATCTTCCAACAGTATAAGCTTCAGCTTAACTGGATGTCCCTCAAGGATGCCATAACAGATAGCTTTACGGTTCTTCAGAATGTTCAGTGGTTTGAGCTTCTTGAAGGCAAGCAAGGGAAGGCTTTGCCTGCACTCGAGTTGATGGGATTAGGAAGATTGGCCAATGAAAAGCCAAGGATGCTGTCAATGGGCCAGCGGAAAAGAGTGCAACTTGCCAGGTTGCTGGCAATCGACCGGCCCATATGGTTGTTAGATGAGCCTTCAGTTGCATTAGATGATGAAGGTGTGAAGTTACTTCAGTACATTGTTGCAGAACACAGGCGGCAGGGTGGAATTGTGATTGTGGCAACTCATTTACCCATTGAGATAGAAGATTCCATGGTCTTGAAGCTGCCGCCAAGGTTTCCGAGGAGGATGACTTTCTTTGATATGCTTGATCGGGCGGATATTGCCTAA 690 0.4681 MSIGRPPFPRLLLNNVSCMRDAQQILRHVNVSVHDGGALVLSGANGSGKTTFLRMLAGFTRPSAGEILWNGHNIQESGIFQQYKLQLNWMSLKDAITDSFTVLQNVQWFELLEGKQGKALPALELMGLGRLANEKPRMLSMGQRKRVQLARLLAIDRPIWLLDEPSVALDDEGVKLLQYIVAEHRRQGGIVIVATHLPIEIEDSMVLKLPPRFPRRMTFFDMLDRADIA* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2112 229 PANTHER ABC TRANSPORTER I FAMILY MEMBER 1 9 223 IPR005895 GO:0017004|GO:0022857
Dod05g2112 229 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 200 IPR027417 -
Dod05g2112 229 SMART AAA_5 35 223 IPR003593 -
Dod05g2112 229 TIGRFAM ccmA: heme ABC exporter, ATP-binding protein CcmA 13 209 IPR005895 GO:0017004|GO:0022857
Dod05g2112 229 Pfam ABC transporter 26 166 IPR003439 GO:0005524
Dod05g2112 229 Gene3D - 9 208 IPR027417 -
Dod05g2112 229 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 11 229 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2112 Dod-Chr5 46962851 46963540 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2112 24 178 Calmodulin-binding Proteins AT2G36910 27.746 1.68e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2112 - - jre:109012900 400.979