Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2072 ATGGCGTTCGATCAAACTTCCGTTCCCAAAGATCTCCGCCCATTGAACGTTGCTTCGACCATGGCCACGGCGGACGAGCCACTCATTTCGCCGGCGGCCACCGCTACAACCCCTCACACTCCCAATTCTGCTCGCGACTTCGGTGGCAGCCCTGGCACGCCGCCCGTCCCTCTCTTCTACCAGCCGCCGCTCTCCGACGCTGCCGCTGCCATCGCCGGATTGAGCTACGGCAACGTAGCCTCCGGAGCCTCTCCGGCCGCCGCCGCCACGTGGTGCGTTCGCCCCGCCGTTTCCATTGCGCACCCCACCGTGAACCCTGCCGCAATTGGGTTTGGCTACGGTCATAGTTGTTGCAATAGGGCTGGACCTGGGAATGCTTTGAATTTGGGGAACTGGGTAGGTAGTGGTGCTAGTAGTGTTGCATTGGATAAGGCTTGTAATGATGCTGCAAATGGTTTTGCTGCTTATGGTGGGGCTCTTAGGGGCAACAACAACAACAACAGGGTCGTTGCCGATGCCACTGATCATGCTGGTTATGGTGGCCACAGTGCTGGCCAGCCGGTTGATCATGCTGGTTATGGTGGCCACAGTGCTGGCCAGCCGGTTGATCATGCCAGTGAGGATGGTGTTAGCGTCAGCAGCAGCGGCGGCAATGAATCGGTCTCGGGGAGGAAGGTGAAGTTCTTGTGCAGTTTTGGTGGGAAGATTCTTCCCAGGCCTAGTGATGGGGTGTTGAGATATGTAGGAGGGAAGACAAGGATAATTAGTGTTAGGAGGGATGTTAGCTTCAATGATTTGATGCAGAAGATGTTTGATACTTATGGGCAGCCTGTGGTCATCAAGTATCAGCTCCCTGAAGAGGAGCTTGATGCGCTGGTTTCGGTTTCGTGCCCTGATGATGTTGAGCATATGATGGAGGAGTATGAGAAGTTGATGGAGAGGTCCCCTGATGGTTCTGCTAAGTTGAGGGTTTTCCTGTTCTCTGCTTCTGAGCTTGACCTTTCTGGTGGGGTGCAATTTGGAGACTTGCATGATAGTGGCCTGAGATATGTTGAGGCTGTGAATGGGATTGCTGATGGGATTAGTATTGGGATCAGTAGGAAGGAGAGTGTTACAAGTGCAGCCTCAACTCAGAACTCTGATTTGAGTGCGGCAGAGACTTTTGATAGCTTAATTTCTGGTCGAGGAGATTTAAGTGCGACCCCTAAGGGGAATGTAGCACCCTCAACTGACATAACTGCACATTTGGTGGTCTCTGAGCCAAGTGCAGCAGGTTAA 1278 0.5352 MAFDQTSVPKDLRPLNVASTMATADEPLISPAATATTPHTPNSARDFGGSPGTPPVPLFYQPPLSDAAAAIAGLSYGNVASGASPAAAATWCVRPAVSIAHPTVNPAAIGFGYGHSCCNRAGPGNALNLGNWVGSGASSVALDKACNDAANGFAAYGGALRGNNNNNRVVADATDHAGYGGHSAGQPVDHAGYGGHSAGQPVDHASEDGVSVSSSGGNESVSGRKVKFLCSFGGKILPRPSDGVLRYVGGKTRIISVRRDVSFNDLMQKMFDTYGQPVVIKYQLPEEELDALVSVSCPDDVEHMMEEYEKLMERSPDGSAKLRVFLFSASELDLSGGVQFGDLHDSGLRYVEAVNGIADGISIGISRKESVTSAASTQNSDLSAAETFDSLISGRGDLSATPKGNVAPSTDITAHLVVSEPSAAG* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2072 425 MobiDBLite consensus disorder prediction 26 52 - -
Dod05g2072 425 CDD PB1_UP2 229 327 - -
Dod05g2072 425 SMART PB1_new 240 329 IPR000270 GO:0005515
Dod05g2072 425 Gene3D - 246 329 - -
Dod05g2072 425 MobiDBLite consensus disorder prediction 33 47 - -
Dod05g2072 425 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 176 370 - -
Dod05g2072 425 Pfam PB1 domain 245 328 IPR000270 GO:0005515
Dod05g2072 425 PANTHER SERINE-THREONINE PROTEIN KINASE 176 370 - -
Dod05g2072 425 SUPERFAMILY CAD & PB1 domains 241 332 - -
Dod05g2072 425 MobiDBLite consensus disorder prediction 192 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2072 Dod-Chr5 46659242 46660519 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2072 224 410 MAP Kinase Kinase Kinase AT3G46920 57.292 1.18e-60 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2072 - - zju:107427772 374.4