Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2063 ATGGCAACCTACCATTATTTCAGGCAAAACCTGGCCACTTTCTGGCAATGCAGTCTCAAAGATTCTGGCCATCCCTGGTGTTTTCTTCTCCCTCCCTGGTTGCAGGTGTTGTGTGGTCTGTGGAGAATGGGAAGTAATGGTACTGAAAAGATGCCTGGCAATACCATCACGGGAAGTTCAGAAACCACTATTGAGATAAAGCTTAAAACATTGGATTCACAAACTTACACCCTCAGAGTGGATAAACAGATGCCAGTCCCTGTTCTCAAAGAACAGATTGCTTCTATAACTGGAGTGTTATCAGATCGACAGCGCTTAATTTGCCAAGGAAAGGTTCTAAAGGATGATCAACTCCTGTCTGCCTACCATGTTGAAGATGGTCATACCTTGCATATGGTTGTCAGGCATCCTGATCTACCATTACCCGGAAGTTTGCCCAATCATTCAGGGACTGACCCAAACTCAAGTTCAAGCCATGATCATAGTAGTCAAGTATCCCCAGGTGTATTTATTGAAACGTTCAATGTGCCTGTTCAGGGAGATGGAGTTTCTCCTGAATTCAGTAGGATTGTTTCTGCTTTACTAGGATCTATTGGAATTTCAAATTTTGGAAGTGCCAGTGAAGGGATCGATGTCAGGGAGCATGATTCCCAAGGCTTTGTAAGAACATCAAGTTCCAGTGGCTTATCAGATTCATCTCATCCTCAACCTGAACAAGCAGGGTTGCGGATTTCTTCTGATAGATTGCGTAATACCTTTGGAAATCCAGCAGCAGCTCCTCTGGGGTCTTTGCAGCCTCAGGTGATTCCTGATTCTTTGACAACTTTGTCTCAATACCTGAGTCATTTAAGCCGTGAATTCAATGCAATTGTCAGAGAAGGGGGGAATAATGTTGAAGCAGCTGAGGCTCATAGGAGTGAAGAAATGGGATCTGTTTCTTCACGATTGGGTTCAACACCCGAAGCACTTTCATCACCTGCATCCTTGGCAGAAGTACTGCATTCTACCAGACAAATGATGATTGAACAAGCTGGAGAGTGCCTACTTCAACTTGCAAGACAGCTAGAGAATCAAGCAAATGTAACTGATCCTTTGTTGCGGTCAAGCATTCAGTCTAGGGTTTTGAGGACTGGAGTTCAATTTTATAACCTTGGTGCATTATTACTTGAGCTTGGTCGCACAACCATGACATTGCGGTTGGGTCAAACACCGTCTGAAGCTGTAGTTAATGGTGGGCCTGCAGTTTTCATATCTCCATCTGGTCCTAATCATATCATGGTTCAGCCTCTTCCTTTTCAACCCGGAGCAAGCTTTGGCACTCCCCCTGTAGGAACTGCTCAGTCTAACTCAAGTTTAGGTAGTGGACTGGGCTCAAGTTTTTTCCCTAGGCGGATCGATATACAGATACGACGAGGGATATCAACAACAGCACCAAATGCCAATCAAGAAGAGCGTGGTCATACAGAATCTGCTTCAGTGCAAAGAACTCATGTTAATCAGGCAACCTCAAGGCGTCCAGATGCATCTAGTACTGGGGAGTCAGGCGTAAGGATAGTGCCAATTAGAACCATGGTAGCAACAGTACCAGGTCCTTTAGTTCGTCCACCTTCCGATCCATCTGGTAATTCTATAGGGCTTTACTATCCAGTTCTTGGGAGATTTCAACATGTATCTTCAGGACATGCAAATAGTGAACAGGGATCTGAACCACCTAGTCAGCATCACGCTGTGCAGCAGTCAAATCCTGAACCCACATTGCCAGGGCAAACCATGGAAGATTCTGCTAGGAATGGATCCTCGTCAACTCCTACCACAAGCTCGAATTCCCGTGTTGTGAATATCAATATTCTAGCAGCTGGTGGGGCCCAAAACAACCAAGACTCTGAGCGACAGATACCAAATAGTGTACTTCAGTTTATAAGGACTCTCTTTCCTGGTGGAGAGATTCATGTTGAAGACTCAAGTTTACAGGGAGCAACTGTGGGTTCTACCTCAGAGCCGGCTGCAACGTCAAGGGTTGGTGCCCACGTCCCTGAAGCTGAACCTAGAGCTAGTGATGAAGGAATATTTTTGTCTAATGTACTCCGGGAGATCATGCCCCTCATCTCTCAACAAGCGGGGTCTGAGGGAAACCCTTCAGAGGATCAAGTGCCTCAGGATTCTTCAACCCAGGTTGAAACTGATGCTGGGACATCGCGAAGATGTGGTTCTGAGCCTAGCCCCCCAAATCCAAAACGTCAAAAGATGGAGTGA 2253 0.4576 MATYHYFRQNLATFWQCSLKDSGHPWCFLLPPWLQVLCGLWRMGSNGTEKMPGNTITGSSETTIEIKLKTLDSQTYTLRVDKQMPVPVLKEQIASITGVLSDRQRLICQGKVLKDDQLLSAYHVEDGHTLHMVVRHPDLPLPGSLPNHSGTDPNSSSSHDHSSQVSPGVFIETFNVPVQGDGVSPEFSRIVSALLGSIGISNFGSASEGIDVREHDSQGFVRTSSSSGLSDSSHPQPEQAGLRISSDRLRNTFGNPAAAPLGSLQPQVIPDSLTTLSQYLSHLSREFNAIVREGGNNVEAAEAHRSEEMGSVSSRLGSTPEALSSPASLAEVLHSTRQMMIEQAGECLLQLARQLENQANVTDPLLRSSIQSRVLRTGVQFYNLGALLLELGRTTMTLRLGQTPSEAVVNGGPAVFISPSGPNHIMVQPLPFQPGASFGTPPVGTAQSNSSLGSGLGSSFFPRRIDIQIRRGISTTAPNANQEERGHTESASVQRTHVNQATSRRPDASSTGESGVRIVPIRTMVATVPGPLVRPPSDPSGNSIGLYYPVLGRFQHVSSGHANSEQGSEPPSQHHAVQQSNPEPTLPGQTMEDSARNGSSSTPTTSSNSRVVNINILAAGGAQNNQDSERQIPNSVLQFIRTLFPGGEIHVEDSSLQGATVGSTSEPAATSRVGAHVPEAEPRASDEGIFLSNVLREIMPLISQQAGSEGNPSEDQVPQDSSTQVETDAGTSRRCGSEPSPPNPKRQKME* 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2063 750 PANTHER SCYTHE PROTEIN UBIQUITIN-LIKE DOMAIN PROTEIN 43 750 - -
Dod05g2063 750 MobiDBLite consensus disorder prediction 135 165 - -
Dod05g2063 750 PRINTS Ubiquitin signature 74 94 IPR019956 -
Dod05g2063 750 PRINTS Ubiquitin signature 116 137 IPR019956 -
Dod05g2063 750 PRINTS Ubiquitin signature 95 115 IPR019956 -
Dod05g2063 750 MobiDBLite consensus disorder prediction 704 738 - -
Dod05g2063 750 MobiDBLite consensus disorder prediction 147 165 - -
Dod05g2063 750 MobiDBLite consensus disorder prediction 217 240 - -
Dod05g2063 750 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 43 750 - -
Dod05g2063 750 MobiDBLite consensus disorder prediction 474 510 - -
Dod05g2063 750 Pfam Ubiquitin family 66 135 IPR000626 GO:0005515
Dod05g2063 750 Gene3D - 57 148 - -
Dod05g2063 750 MobiDBLite consensus disorder prediction 559 611 - -
Dod05g2063 750 ProSiteProfiles Ubiquitin domain profile. 64 139 IPR000626 GO:0005515
Dod05g2063 750 MobiDBLite consensus disorder prediction 219 240 - -
Dod05g2063 750 MobiDBLite consensus disorder prediction 474 518 - -
Dod05g2063 750 MobiDBLite consensus disorder prediction 703 750 - -
Dod05g2063 750 MobiDBLite consensus disorder prediction 303 323 - -
Dod05g2063 750 SMART ubq_7 64 135 IPR000626 GO:0005515
Dod05g2063 750 SUPERFAMILY Ubiquitin-like 58 143 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2063 Dod-Chr5 46560819 46569563 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2063 64 135 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 37.500 8.68e-09 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2063 K23390 - gmx:100783070 1045.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2063 05 46560819 46569563 Dod05g2063 05 46560819 46569563 ECH