Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2055 ATGTTGGCTGTGAAGGGAGGTAAGAGGCCACCATGGGTGGGACTTGGAGCTGCCGTGTGGGTTCAGATAGCTTCGGGAAACGCGTACGCATTCCCACTGTACTCTCACTCTTTGAAATCAGTTCTGGGGTTCAACCAGCGCCAGCTTACCCTTCTCGGTGTGGCCAACGATTTTGGTGAGAATGTTGGGCTTCTCCCTGGTCTTGCCTCTAACAAGTACCCTCCTTGGCTTATTCTCTTCGTCGGTGCTCTCTTCTCTTTCATTGGTTATGGTGTTCTCTGGCTTGCCCTCAGTAACACTCTTCCATCCCTTCCTTACTTGTTGCTATGGTTTGCCCTTGTCATTGCCACCAACAGTTGTGCGTGGTTATCCACTGCCATCCTTGTAACCAACATGAGGAACTTCTCTGTAAGTAGAGGCACGGTTGCGGGAATCCTCAAAGGTTATGGAGGGCTTAGTGCTGCGGTTTTTACTCAAATCTACAGCATAGTTCTTCAAAATTCTTCTTCCAAGTTCCTGTTGTTCCTTGCCCTTGGAATTCCTGCTTTATGCTTCAGCGTGATGTTTCTTGTTAGGCCCTGTACTCCACTTTCTGGGGAAGATTCTGAAGAAAAAGGGCATTTTCTATTTATCCAAGGTTCTAGTGTGGTTTTGGGTTTATATATTCTTGCTACAAATATATTTGGTGACATTCTTCCCTTAAGTGGTGGACTTTCCTATATCTTAGTGGCTGTGATGATTCTGCTTCTCATGGCTCCACTTGCTATCCCTATAAAGATGACATTGTGTCCGAAAAGAGCTGCAAAATCAGAAACACCTCAGCAAGAAGTTGGATCTTCGGACCGTCTGATTCAAGCAGGCAAAGATGACAACACTGAGCCCTTGTTAACATCTTCATCAGCAAGTGGCCTTGGAAGTTTTTACGAGACGGATCCTTCATCTGAGGTTGCTATGCTTCTTGCTGTGGGCGAGGGAGCAGTAAAGAAGAAGAGAAGGCCCAAGAGAGGGGAAGATTTCAAATTTACTGAGGCAATAGTAAAGGCTGATTTCTGGCTACTATTCTTTGTTTACTTTGTTGGTGTTGGAACCGGGGTCACTGTTCTTAACAATCTGGCCCAAATAGGCATTGCACAAGGTGTGGAAGATACCACCATCTTGTTGTCACTTTTCAGCTTTTTCAATTTTGTGGGTCGGCTTGGTGGAGGAATTGTTTCAGAACACTTTGTTAGGACTAAAACGATCCCACGTACAGTTTGGATGACATGCACACAGATAATCATGATCATCTTGTACCCGATGTTTGCCTTTGCTATCAATGGGACCCTTTATCCTTCGATTGCATTCCTTGGTATCTGCTATGGCGTGCAATTTTCCATAGTGCTTCCAACTGTCTCGGAGCTTTTTGGTTTGGAGCACTTCGGCTTATTGAGCAGCTTCATATCTTTGGGGAATCCACTTGGTGCATTCCTTTTCTCAGCTCTTCTGGCAGGATATGTATATGATAATGAGGCAGCAAAGCAACATGGTCTAGCAGTTATTGCTTCAAGTGTGTCCTGTTTGGGTCCAAATTGCTTTAAGCTCACCTTCCTGGCCCTGGCTAGTGTGTGCGCTGTGGGTACCATTGCTGGCATTATCTTGTCTATAAGAATTAAGCCAGTTTACCAAATGCTTTATGCTGGGGGTTCCTTCAAGTTACCACAAACGTCAAGTCACTAA 1716 0.4522 MLAVKGGKRPPWVGLGAAVWVQIASGNAYAFPLYSHSLKSVLGFNQRQLTLLGVANDFGENVGLLPGLASNKYPPWLILFVGALFSFIGYGVLWLALSNTLPSLPYLLLWFALVIATNSCAWLSTAILVTNMRNFSVSRGTVAGILKGYGGLSAAVFTQIYSIVLQNSSSKFLLFLALGIPALCFSVMFLVRPCTPLSGEDSEEKGHFLFIQGSSVVLGLYILATNIFGDILPLSGGLSYILVAVMILLLMAPLAIPIKMTLCPKRAAKSETPQQEVGSSDRLIQAGKDDNTEPLLTSSSASGLGSFYETDPSSEVAMLLAVGEGAVKKKRRPKRGEDFKFTEAIVKADFWLLFFVYFVGVGTGVTVLNNLAQIGIAQGVEDTTILLSLFSFFNFVGRLGGGIVSEHFVRTKTIPRTVWMTCTQIIMIILYPMFAFAINGTLYPSIAFLGICYGVQFSIVLPTVSELFGLEHFGLLSSFISLGNPLGAFLFSALLAGYVYDNEAAKQHGLAVIASSVSCLGPNCFKLTFLALASVCAVGTIAGIILSIRIKPVYQMLYAGGSFKLPQTSSH* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2055 571 SUPERFAMILY MFS general substrate transporter 11 195 IPR036259 -
Dod05g2055 571 CDD MFS_Mch1p_like 10 540 - -
Dod05g2055 571 SUPERFAMILY MFS general substrate transporter 206 552 IPR036259 -
Dod05g2055 571 Pfam Nodulin-like 11 258 IPR010658 -
Dod05g2055 571 PANTHER NODULIN-LIKE/MFS TRANSPORTER 2 570 - -
Dod05g2055 571 MobiDBLite consensus disorder prediction 269 298 - -
Dod05g2055 571 Gene3D MFS general substrate transporter like domains 346 553 IPR036259 -
Dod05g2055 571 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 2 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2055 Dod-Chr5 46468379 46472128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2055 2 571 Nodulin-like Gene Family AT1G80530 55.944 0.0 648
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2055 - - gmx:100787328 894.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2055 05 46468379 46472128 Dod05g2055 05 46468379 46472128 ECH
Dod05g2055 05 46468379 46472128 Dod03g1738 03 25462257 25465695 PCT