LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod05g2035	ATGGGAGCAGCGATACTCCCAGATCTCGGAACTGAGATTCTGATCCCTGTGTGTGCCGTCATCGGAATCGGGTTCGCCCTCTTCCAGTGGCTGCTCGTCTCCAAGGTGAAGCTCTCCGCCGCCAGAGACGCTTCCCCAAACGCCGCTGGCAAAAACGGTTACAACGATTACCTCATCGAAGAAGAAGAAGGCATCAACGACCACAACGTTGTTCTCAAGTGCGCTGAGATCCAGAGCGCCATTTCTGAAGGAGCGACTTCTTTCCTTTTCACTGAGTACAAGTATGTGGGAATCTTCATGGTGGCTTTTGCCATCTTGATATTCATTTTCCTTGGTTCCGTGGAAGGATTCAGCACTAGCCACCAGCCTTGCACCTATGACCAGACTAAGATGTGTAAGCCAGCTCTTGCCACTGCACTTTTCAGCACCATATCATTTCTGCTCGGAGGCATCACATCGATTATCTCTGGTTTCCTTGGAATGAAAATTGCTACTTATGCTAATGCAAGAACCACCTTGGAGGCAAGAAAGGGTGTTGGAAAGGCTTTCATTACTGCATTTAGATCTGGTGCTGTTATGGGATTCCTCCTTGCTGCGAATGGACTTTTGGTTCTTTACATTGCCATCAATGTTTTCAAGATCTACTATGGTGATGACTGGGGTGGTCTCTTTGAGGCCATTACTGGTTATGGGCTTGGTGGCTCTTCGATGGCACTTTTTGGCAGAGTTGGAGGAGGTATCTATACCAAGGCTGCTGATGTTGGTGCTGATCTTGTTGGCAAGGTTGAAAGAAACATTCCCGAGGATGACCCAAGAAATCCAGCTGTGATTGCTGATAATGTTGGTGATAACGTTGGAGATATAGCTGGCATGGGGTCTGATCTTTTTGGTTCTTATGCTGAGTCGTCCTGTGCTGCCCTTGTTGTTGCTTCAATCTCTTCATTTGGGGTGAATCATGAATTGACTGCTATGTTATACCCTCTCATTGTCAGTTCTGTGGGGATCCTTGTTTGTTTGCTTACCACCTTAGTTGCGACTGACTTTTTTGAGATCAAGGCTGTGAAGGAAATTGAGCCGGCATTGAAAAGACAGCTCATTATTTCCACCGCATTGATGACTGTTGGGATTGCAATTGTTAGTTGGATTGCACTCCCATCATCCTTTACTATCTTCAATTTTGGAGTGCAGAAAGACGTCAAGAACTGGCAGCTATTTCTGTGTGTTGCTGTTGGTCTTTGGGCAGGGCTCATTATTGGATTTGTGACTGAGTACTTTACCAGCAATGCATATAGCCCTGTGCAAGATGTTGCAGATTCCTGCAGGACTGGTGCTGCCACTAATGTAATATTTGGGCTTGCTTTGGGATACAAGTCTGTCATTATCCCGATCTTTGCTATTGCAATTAGTATTTTTGTCAGCTTCAGCTTCGCTGCCATGTACGGTATTGCTGTTGCTGCACTTGGGATGCTGAGTACCATAGCCACTGGATTGGCCATTGATGCATATGGTCCAATTAGTGACAATGCTGGTGGTATTGCTGAGATGGCTGGGATGAGCCACAGAATCCGAGAGAGAACTGATGCCCTTGATGCTGCAGGAAACACAACTGCTGCTATTGGGAAGGGTTTTGCTATTGGTTCTGCTGCCCTTGTGTCTCTGGCCCTCTTCGGTGCCTTCGTGAGCCGAGCTAATATTTCAACCGTTGATGTGTTGACTCCAAAGGTTTTCATTGGTTTGATTGTGGGTGCAATGCTTCCATACTGGTTTTCTGCCATGACCATGAAAAGTGTGGGAAGTGCTGCCCTGAAGATGGTCGAGGAAGTACGCAGGCAATTCAATACCATTCCGGGATTGATGGAGGGAACTGCCAAGCCTGACTATGCTACGTGTGTTAAGATCTCCACTGATGCTTCTATCAAAGAAATGATCCCTCCTGGTGCTCTTGTCATGCTCACACCCCTTATCGTGGGGATCTTCTTTGGTGTAGAAACACTTTCTGGTGTCCTTGCTGGATCTCTGGTGTCTGGTGTACAGATTGCTATCTCTGCATCCAACACTGGTGGTGCTTGGGACAATGCCAAGAAGTACATTGAGGCTGGTGCATCTGAGCATGCAAGAAGCCTTGGTCCAAAAGGGTCAGATCCTCACAAGGCAGCTGTTATTGGTGACACCATTGGGGACCCTCTCAAGGACACATCTGGACCCTCACTCAACATCCTCATCAAGCTTATGGCCGTTGAGTCCCTTGTGTTTGCTCCCTTCTTTGCTACACATGGTGGCCTACTGTTCAAGATCTAA	2298	0.4721	MGAAILPDLGTEILIPVCAVIGIGFALFQWLLVSKVKLSAARDASPNAAGKNGYNDYLIEEEEGINDHNVVLKCAEIQSAISEGATSFLFTEYKYVGIFMVAFAILIFIFLGSVEGFSTSHQPCTYDQTKMCKPALATALFSTISFLLGGITSIISGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLYIAINVFKIYYGDDWGGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGVNHELTAMLYPLIVSSVGILVCLLTTLVATDFFEIKAVKEIEPALKRQLIISTALMTVGIAIVSWIALPSSFTIFNFGVQKDVKNWQLFLCVAVGLWAGLIIGFVTEYFTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAISIFVSFSFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRANISTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARSLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGLLFKI*	766

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod05g2035	765	Hamap	Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA].	9	756	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Dod05g2035	765	TIGRFAM	V_PPase: V-type H(+)-translocating pyrophosphatase	11	761	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Dod05g2035	765	PIRSF	H+-PPtase	13	764	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Dod05g2035	765	Pfam	Inorganic H+ pyrophosphatase	48	751	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Dod05g2035	765	PANTHER	K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP	1	765	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Dod05g2035	765	PANTHER	PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP	1	765	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod05g2035	Dod-Chr5	46332851	46338517	Dispersed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod05g2035	4	629	Primary Pumps ATPases	AT1G15690	87.599	0.0	1120

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod05g2035	K23025		-	gmx:100775864	1434.47

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Dod05g2035	05	46332851	46338517	Dod05g2035	05	46332851	46338517	ECH

Showing 1 to 1 of 1 entries