Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2020 ATGTCCATCAACCACATAGTTAATGGCGACCCTGAATCCCTCCACCAACCTTTGCTGTCTTCCCACAGATCCCTCGTCAACTCCACATCACAGGTTGCCATCGTGGGCTCCAATGTCTCCCCAATTGAGAGCCTTGACTACGAGATCTTCGAGAATGAGTTCTTCAAGCAGGATTGGAGGAGCAGAGGGAAGGCCCAGATGTTCCAGTACATATGCATGAAGTGGCTCTTGTGCTTCCTTATTGGCTTGATCGTTAGCCTTGTTGGTTTCTGCAACAATCTCGCCGTTGAGAATCTCGCTGGCATGAAGTTTGTTATCACATCCAATATGATGTTGGAGAGAAGGTTTCTGGTGGCCTTTGCAGTCTTTTTCGCTTCAAATTTGAGCCTCACGCTTTTTGCTTCTATAATCACAGCTTTGATAGCACCTGCTGCTACCGGTTCGGGTATACCGGAGGTGAAAGCTTACTTGAATGGAGTGGATGCACCTGGAATATTTACTATACGGACTCTGTTTGTTAAGATTATTGGAAGCATTACAGCAGTGTCATCATCACTTCTCATTGGGAAGGCTGGGCCTATGGTCCATACAGGTGCATGTGTGGCATCACTGTTGGGGCAGGGTGGGTCAAAGAGATATGGATTAACATGGAAATGGTTACGTTTTTTTAAGAATGACAGAGATCGACGAGACCTGGTAATGTGCGGATCAGCTGCTGGAATTGCTGCTGCCTTTCGTGCCCCTGTTGGTGGGGTGTTGTTCGCTCTCGAAGAGATGACATCTTGGTGGAGAAGTGCGCTTCTGTGGAGAGCTTTCTTTACGGCAGCAATAGTTGCAATTATGCTTCGTGCTTTGATTGATGTATGTTTAAGTGGTAAATGTGGGTTATTTGGGAAAGGGGGTCTGATAATGTTTGATGCTTATTCAGCTAGTGTTTCATATCATTTGGCGGATGTTCCTCCGGTGTTTATTCTTGGCATTATAGGAGGTATACTTGGAAGCTTGTATAACTCTTTGCTGAGCAAAGTTCTTCGTGTATACAATTTTATCAATGAGAAAGGCACCATTTGCAAAATTTTGCTTGCTGGTGTAATCTCCATTTTAACCTCCGTTCTTCTTTTTGGATTACCATGGTTTGCGTCCTGCCGACCTTGTCCACTTGATGCAACTGAGCCTTGTCCGACAATAGGCCGCTCTGGTAACTACAAGAAATTCCAATGCCCTCCTAATCACTACAATGATCTTGCCAGCCTCGTTTTTAACACAAATGACGATGCAATAAAAAATCTATTTAGCAGGAACACCGATAATGCGTTTCAGTATTCATCAATGTTCATCTTTTTCATCACATGCTTTTTCTTGAGTATCTTTAGCTATGGAGTTGTTGCTCCAGCTGGTCTTTTTGTGCCAGTTATTGTGACCGGTGCATCTTATGGGCGCTTTGTTGGAATGCTGGTCGGCAAAAACTCTAATCTTAACCATGGCCTTTATGCTGTACTTGGCGCAGCTTCATTTCTTGGCGGATCTATGAGGACGACAGTTTCTTTGTGTGTAATTATTCTAGAGCTGACCAATAACTTGTTATTGCTACCATTGATCATGATGGTGCTTTTGGTATCTAAGGCTGTAGCAGATGCTTTCAATGCAAACGTATATGACCTTATAATGAAAGCCAAGGGTTTTCCTTATCTAGAAACTCATGCTGAGCCATATATGAGGCAGCTAACAGTAGGTGACGTAGTCACAGGGCCACTTCAGATGTTTAATGGCATTGAGAAGGTTCGTAACATAGTGTTTGTTCTGAAAACTACGAGGCACAATGGGTTTCCTGTTATTGATGAGCCTCCAATTTCTGAAGCACCAGTTTTATTCGGCATAATCCTTCGTGACCATCTTGTCACGTTATTAAAGAAGAAAGCCTTTTTGTCCACACCAAGGGCAATAGGTGTTGACCTCTTCAAGCAGTTTTCAGCAGATAATTTTGCAAAGAGGGGTTCAAGCAAAAGCGAAAAGATAGAAGATATACATTTAACGGAGGAAGAGATGGACATGTACATAGATCTACATCCATTTACTAATACTTCACCTTATACTGTTGTGGAGACAATGTCATTGGCAAAGGCCCTCACACTTTTCCGAGAAGTTGGTTTAAGGCACCTGCTAGTGATACCCAAGATCTCTGGTAGATCACCCGTAGTGGGTATACTGACACGGCACGATTTCATGCCGGAACATATATTGGGTTTGCATCCTTTGCTGGTAAGAAGCAGGTGGAAGAGATTAAGATTCCAGCTCCCTTGTCTGGGAAAGTTCTTCAGAGCATCCGACCAAGCTTACCAGGCCTGA 2346 0.4365 MSINHIVNGDPESLHQPLLSSHRSLVNSTSQVAIVGSNVSPIESLDYEIFENEFFKQDWRSRGKAQMFQYICMKWLLCFLIGLIVSLVGFCNNLAVENLAGMKFVITSNMMLERRFLVAFAVFFASNLSLTLFASIITALIAPAATGSGIPEVKAYLNGVDAPGIFTIRTLFVKIIGSITAVSSSLLIGKAGPMVHTGACVASLLGQGGSKRYGLTWKWLRFFKNDRDRRDLVMCGSAAGIAAAFRAPVGGVLFALEEMTSWWRSALLWRAFFTAAIVAIMLRALIDVCLSGKCGLFGKGGLIMFDAYSASVSYHLADVPPVFILGIIGGILGSLYNSLLSKVLRVYNFINEKGTICKILLAGVISILTSVLLFGLPWFASCRPCPLDATEPCPTIGRSGNYKKFQCPPNHYNDLASLVFNTNDDAIKNLFSRNTDNAFQYSSMFIFFITCFFLSIFSYGVVAPAGLFVPVIVTGASYGRFVGMLVGKNSNLNHGLYAVLGAASFLGGSMRTTVSLCVIILELTNNLLLLPLIMMVLLVSKAVADAFNANVYDLIMKAKGFPYLETHAEPYMRQLTVGDVVTGPLQMFNGIEKVRNIVFVLKTTRHNGFPVIDEPPISEAPVLFGIILRDHLVTLLKKKAFLSTPRAIGVDLFKQFSADNFAKRGSSKSEKIEDIHLTEEEMDMYIDLHPFTNTSPYTVVETMSLAKALTLFREVGLRHLLVIPKISGRSPVVGILTRHDFMPEHILGLHPLLVRSRWKRLRFQLPCLGKFFRASDQAYQA* 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2020 781 ProSiteProfiles CBS domain profile. 692 752 IPR000644 -
Dod05g2020 781 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 12 768 - -
Dod05g2020 781 PRINTS Chloride channel signature 551 565 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Dod05g2020 781 PRINTS Chloride channel signature 174 193 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Dod05g2020 781 PRINTS Chloride channel signature 495 511 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Dod05g2020 781 PRINTS Chloride channel signature 143 160 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Dod05g2020 781 PRINTS Chloride channel signature 238 257 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Dod05g2020 781 PRINTS Chloride channel signature 463 483 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Dod05g2020 781 PRINTS Chloride channel signature 513 532 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Dod05g2020 781 Pfam Voltage gated chloride channel 131 545 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Dod05g2020 781 Pfam CBS domain 693 741 IPR000644 -
Dod05g2020 781 Gene3D Clc chloride channel 66 564 - -
Dod05g2020 781 CDD CBS_pair_voltage-gated_CLC_euk_bac 567 744 - -
Dod05g2020 781 SUPERFAMILY CBS-domain pair 567 742 IPR046342 -
Dod05g2020 781 PRINTS Plant CLC chloride channel signature 48 56 IPR002251 GO:0005247|GO:0006821|GO:0016020
Dod05g2020 781 PRINTS Plant CLC chloride channel signature 259 267 IPR002251 GO:0005247|GO:0006821|GO:0016020
Dod05g2020 781 PRINTS Plant CLC chloride channel signature 291 298 IPR002251 GO:0005247|GO:0006821|GO:0016020
Dod05g2020 781 PRINTS Plant CLC chloride channel signature 273 283 IPR002251 GO:0005247|GO:0006821|GO:0016020
Dod05g2020 781 PRINTS Plant CLC chloride channel signature 415 431 IPR002251 GO:0005247|GO:0006821|GO:0016020
Dod05g2020 781 SUPERFAMILY Clc chloride channel 52 566 IPR014743 -
Dod05g2020 781 PANTHER CHLORIDE CHANNEL PROTEIN 12 768 - -
Dod05g2020 781 SMART cbs_1 584 637 IPR000644 -
Dod05g2020 781 SMART cbs_1 695 746 IPR000644 -
Dod05g2020 781 Gene3D - 565 744 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2020 Dod-Chr5 46102999 46108663 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2020 12 766 Ion Channels AT5G33280 76.689 0.0 1169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2020 K05016 - gmx:100817901 1264.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2020 05 46102999 46108663 Dod05g2020 05 46102999 46108663 ECH