Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2019 ATGGCCATCACTGCATTATTCTTGCTGCTGTTGCTGCAATTGTCGGCAATTTTTGGCTCTGCAGTGACTTTACAACCATATGATTGTGGTTCTAAATTGGTGGGTCTTGCATATTCTAGTGATGGTGAAGAAGTGTTTTACTTGAATGGGGATGAAATGAACAAAGTTGATTTCTGTAAGACCCTCCAATTGTATGCTGCAAACGGTTGTGATGTGAAGGACTACTTTGGAAGTACCATCTGTGCTTTGGATGTCTCTTCTGTGAACCTACCTTCAAAGACAGCAAGGAAACTTCTGCAGAAGGATTTAAGCAATAAATCCACAACACAAGGAGTTTCTAAGCCTGTGTCCTCCAATGTTGGTGTATTTGCTGGTGGTGGAGCTTTGTTGGTATGTTGTGTTGTTCTTTGTCCTTGTATTTATGGGAAGAGAAGAAAAGCAACTGCTCATGCTGTTCTGGTCAAGGAGCCAATTTCATTGGATTCAGCTGCTTCCTTTGAAGGAAACGCTGTCCCTGAAAAGATCCCAGCAAGTCCACTTCGGGTGCCGCCTAGCCCTTCAAGATTCTCAATGTCTCCAAAACAACTCAGTAGAATTGAATCATTACATCTAAACCTCACTCAGATTGCAAGAGCTACCCGTAATTTCTCAGAATCACTACAAATAGGAGAAGGAGGTTTTGGAACTGTCTACAAGGCTCAGTTAGAAGATGGCCTGGTTGTTGCAGTAAAACGTGCAAAAAGGGAACATTTTGAGAGTTTGAGAACTGAGTTCAGCAATGAAGTTGACCTTCTGGCCAAGATTGATCATCGGAACCTGGTGAAGCTATTGGGTTATATTGACAAAGGAAATGAACGTCTTCTTATTACAGAGTATGTGCCGAATGGTACTCTTCGAGAACATCTGGATGGTCAGCGCGGAAAGATACTGGACTTTAATCAGCGCCTTGAAATTGCTATTGATGTTGCTCATGGCTTGACCTATCTGCATCTGTATGCAGAAAAGCAAATTATCCATCGAGATGTGAAATCATCCAACATTCTTCTGACAGAGAGCATGCGAGCTAAAGTTGCTGATTTTGGGTTTGCAAGGATTGGTCCTGTGAACTCTGATCAAACACACATTTCAACGAAAGTGAAGGGAACAGTTGGTTATTTGGACCCTGAGTATATGAAAACATACAAACTCACACCCAAGAGTGATGTTTACTCATTTGGAATTTTGCTTTTAGAAATTTTGACAGGTCGTCGTCCTGTGGAGTTGAAGAAAGCTCCTGCAGAGCGGGTTACACTAAGATGGGCCTTCAGGAAGTTCAATGAAGGAAGCGTGGTGGAGCTGCTGGATCCCTTGATGGATGAAACTGTGAACTCAGATGTTCTCATGAAGATGTTTGATTTGGCAATTCAATGTGCAGCTCCCATTCGAGCAGATCGACCTGACATGAAAGCAGTTGGAGAGCAATTGTGGTCAATTAGAGCAGACTACCTTAAGAGTGCCAGAAGAGAGTAA 1509 0.4261 MAITALFLLLLLQLSAIFGSAVTLQPYDCGSKLVGLAYSSDGEEVFYLNGDEMNKVDFCKTLQLYAANGCDVKDYFGSTICALDVSSVNLPSKTARKLLQKDLSNKSTTQGVSKPVSSNVGVFAGGGALLVCCVVLCPCIYGKRRKATAHAVLVKEPISLDSAASFEGNAVPEKIPASPLRVPPSPSRFSMSPKQLSRIESLHLNLTQIARATRNFSESLQIGEGGFGTVYKAQLEDGLVVAVKRAKREHFESLRTEFSNEVDLLAKIDHRNLVKLLGYIDKGNERLLITEYVPNGTLREHLDGQRGKILDFNQRLEIAIDVAHGLTYLHLYAEKQIIHRDVKSSNILLTESMRAKVADFGFARIGPVNSDQTHISTKVKGTVGYLDPEYMKTYKLTPKSDVYSFGILLLEILTGRRPVELKKAPAERVTLRWAFRKFNEGSVVELLDPLMDETVNSDVLMKMFDLAIQCAAPIRADRPDMKAVGEQLWSIRADYLKSARRE* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2019 502 PANTHER OS07G0166700 PROTEIN 17 501 IPR045272 GO:0004714|GO:0006468
Dod05g2019 502 SUPERFAMILY Protein kinase-like (PK-like) 189 491 IPR011009 -
Dod05g2019 502 ProSitePatterns Serine/Threonine protein kinases active-site signature. 337 349 IPR008271 GO:0004672|GO:0006468
Dod05g2019 502 SMART serkin_6 216 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g2019 502 Pfam Protein tyrosine and serine/threonine kinase 221 488 IPR001245 GO:0004672|GO:0006468
Dod05g2019 502 ProSiteProfiles Protein kinase domain profile. 216 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g2019 502 Gene3D Transferase(Phosphotransferase) domain 1 293 501 - -
Dod05g2019 502 ProSitePatterns Protein kinases ATP-binding region signature. 222 244 IPR017441 GO:0005524
Dod05g2019 502 CDD STKc_IRAK 222 488 - -
Dod05g2019 502 PANTHER NODULATION RECEPTOR KINASE-LIKE PROTEIN 17 501 - -
Dod05g2019 502 Gene3D Phosphorylase Kinase; domain 1 186 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2019 Dod-Chr5 46098924 46102465 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2019 103 492 Receptor kinase-like Gene Family AT3G46290 38.945 2.33e-75 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Dod05g2019 PK_Tyr_Ser-Thr 2.7e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2019 - - aprc:113845864 788.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2019 05 46098924 46102465 Dod05g2019 05 46098924 46102465 ECH