Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1980 ATGAAGAAGGTGCGGAGAAAGATCGGGAAGTATGAGGTTGGTCGAACAATTGGCGAAGGGACATTCGCGAAGGTCAAATTCGCGAAGAACACGGAGACAGGGGAGAGCGTGGCTATTAAGATCATGGCTAAGAGCACCATTCTCAAGCATAGAATGGCTGAACAGATTAAAAGAGAGATATCAATAATGAAGATTGTCAGACATCCAAATATAGTTAGGTTGCATGAGGTTTTGGCTGGCCAGACGAAGATCTACATAATTCTCGAGTTCATAATGGGCGGAGAATTATATGATAAAATTGTTCAGCAGGGAAAACTTTCTGAAAGTGAATCTATGCGCTACTTTCAACAACTTATAGATGCTGTTGCTCATTGTCACACGAAGGGTGTGTACCATAGAGACTTGAAGCCTGAAAACCTGCTTCTTGATGCATATGGAAATTTGAAGGTTTCTGACTTTGGATTGAGTGCACTAAGTAAGCAGGGTGTTGACCTTCTTCACACCACATGCGGGACGCCAAATTATGTTGCCCCTGAGGTGCTAGGCAATCAAGGTTATGATGGTGCAGCGGCTGATGTTTGGTCATGTGGAGTCATCCTCTATGTTCTGATGGCTGGATATCTTCCTTTTGAGGAGGCAGACCTTCCAGCACTGTACAAAAGGATCAATGCTGCAGAGTTTGTTTGCCCATGCTGGTTTTCCGCTGGGGCAAACAGATTGATACATAGAATTCTGGATTCTAATCCTAATACACGGATCAAAATCGATGAAATCAGGAAAGATCCATGGTTCAGGAGAAACTATGTTCCTGTCACACTTTGTGAAGATGTGGAAGTGAATTTGGATGATGTTCGGGCAGTTTTTGATGATATTGAGGACCAGTATGTTGCTGAGCGGTCAGAAGGTACTGAGGCAGGTCCTTTGATAATGAATGCATTTGAGATGATTACCTTATCACAAGGGTTGAATCTTTCACCGCTATTTGACAGGCGTCAGGATTATGTGAAGCGGCAAACTCGTTTTGTTTCCGGTAAACCAGCTAAAGTCATAATTTCGTATATTGAAGCTGCTGCAGAGTCAATGGGTCTTAAGGTCCATTCTCGCAATTACAAGATGAGGCTTGAAGGAGTTGCTGCAAATAAGGTTGGACAATTTGCAGTGGTCTTGGAGGTGTTTGAAGTTGCACCATCCCTTTTCATGGTTGATGTTCGAAAGGCAGCTGGTGATGCTCTTGACTATCACAAGTTTTACAAGAATCTTTGTGCCAAACTCGAAAACATTATCTGGAGACACACGGAGACGAGGCCAGATACTAGTCTGTACGACAAATGA 1332 0.4324 MKKVRRKIGKYEVGRTIGEGTFAKVKFAKNTETGESVAIKIMAKSTILKHRMAEQIKREISIMKIVRHPNIVRLHEVLAGQTKIYIILEFIMGGELYDKIVQQGKLSESESMRYFQQLIDAVAHCHTKGVYHRDLKPENLLLDAYGNLKVSDFGLSALSKQGVDLLHTTCGTPNYVAPEVLGNQGYDGAAADVWSCGVILYVLMAGYLPFEEADLPALYKRINAAEFVCPCWFSAGANRLIHRILDSNPNTRIKIDEIRKDPWFRRNYVPVTLCEDVEVNLDDVRAVFDDIEDQYVAERSEGTEAGPLIMNAFEMITLSQGLNLSPLFDRRQDYVKRQTRFVSGKPAKVIISYIEAAAESMGLKVHSRNYKMRLEGVAANKVGQFAVVLEVFEVAPSLFMVDVRKAAGDALDYHKFYKNLCAKLENIIWRHTETRPDTSLYDK* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1980 443 Coils Coil 274 294 - -
Dod05g1980 443 ProSitePatterns Protein kinases ATP-binding region signature. 17 49 IPR017441 GO:0005524
Dod05g1980 443 SUPERFAMILY Protein kinase-like (PK-like) 8 308 IPR011009 -
Dod05g1980 443 ProSiteProfiles NAF domain profile. 305 329 IPR018451 GO:0007165
Dod05g1980 443 ProSiteProfiles Protein kinase domain profile. 11 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g1980 443 Pfam Protein kinase domain 11 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g1980 443 PANTHER - 4 434 - -
Dod05g1980 443 Gene3D Kinase associated domain 1, KA1 308 430 - -
Dod05g1980 443 SMART serkin_6 11 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g1980 443 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 4 434 - -
Dod05g1980 443 Pfam NAF domain 307 366 IPR004041 GO:0007165
Dod05g1980 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Dod05g1980 443 Gene3D Transferase(Phosphotransferase) domain 1 2 307 - -
Dod05g1980 443 CDD CIPK_C 311 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1980 Dod-Chr5 45541260 45549352 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1980 1 372 CBL-interacting serine-threonine protein kinases AT5G35410 74.462 0.0 589
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Dod05g1980 Pkinase 9.5e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1980 - - gmx:100811380 760.37