LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod05g1969	ATGGGCGCTATTGCTGCAACTATGGCCTCCTTGATGGTCTTATTATTTGCAGATAGTGCAAGAGCTGATACACAAATACAACATCCTAGGCAGATACCACTTAATTCATCGTTGTACTCTACTTCTCCGCCCACTTCATGGCCTTCCCCTTCTGGTCTATTTGCATTTGGCTTTTATCCAGAAGGCAGTGGCTTTGTCGTTGGGATTTGGCTGGTTGGCAAGAACAACAACCATACAATGGTATGGACTGCAAACCGAGATGATCCTCCACTCACCTCAAATGCAACGCTACAACTAACCATGGAGGGTAAGCTTGTTCTGCAAACACAAGAAGGACAAAACAAACTTATTGCTAATGCAACTGCTGCTTCTGCATCCATGCTTGATTCTGGGAACTTTGTATTGTACAACAAAAATTCCAGTGTCGTATGGCAGAGCTTTGATTACCCAACTGACACTATACTAGGAGATCAACCTCTATATTATGGGGGTCAACTATTCTCTAGTTCATCAGAGACTAGTCACTCAACTGGACGGTTTCGTCTCAAGATGCAACTTGATGGAAATCTTGTTCTGTATCCAAGATACACAACTGATACAGATCTAGATGCTAATTGGGCCTCTGGTATTAGTGATCTTCAAGGTAGCAAATATCATCTTTACCTCAACAAAACAGGCTCTTTGGTAATCAAGAATGGGAGTGATGGGCTGATCACTTGTGTTCATGATGCTTCATCTTCGACTAGCAACATCGACAATGGCAACAAGACCATTTATCGTGCAACAGTGGATCTTGATGGATTTTTCCGGTTGTATGCACACGATAGCAACGATGCTAGCAACAGTTCTGAAGTAGAAAGTTGGCCAAATGATGATGATGCGTGTACATTAAAGGGTTTTTGTGGCTTCAACAGCTACTGCACATCCGATGATCAGAGACCATACTGCAAATGTCTTCCTGGTTTTGACTTCATTGATCCAAAACAAAACACTCTTGGCTGTACTAGGAGCTTTTCAGAAGCCAAGTGTGGAGGTGAGAAGGATAATACAACATCATTTTGTAGTATGGTCTCTCTGGCGAATTTGGTGTGGGGTTCGAATGATCGTCCTTATGCACAAGCCAAAATGTCACAGGAAGACTGCTCCTCTTCTTGTATGAAGGATTGCAATTGTTGGGCTGCTCTTTATCAGGATGGGGTATGCAAGAAGCAAGAGCCTCCTTTAAGATTTGCTAGAAGGACATCAAAAAGCGACTCCACAGCATTGTTAAAGGTGGGAAATTCGACGTTGAATGGGCGTTTTGGGCCTGGTCAACCACCTCAAATCAGAAGTACTAGTAAAACAGCAATTGTGAAAATTATTCTTGTTACATCGAGTTTCGCTCTGCTTTTATGCTCAAGTATTGGAATATCTAGCCATTTAATTTACAAGATTCGAGTTCTAAGATACAAAAGGTTGTTGGAGATTGGGGATTTGGGCCTGAATGAAGAGGTGACTTTGAGGAGATTTTCATACAGTGAGCTCAAAAAAGCAACAAATGGTTTCAAACATGAGTTGGGCAATGGATGTTTTGGAGCAGTTTATAAAGGGGTTTTGTACAAAGGTAGAAGTAGAAGATTGATTGCAGTGAAGAGACTGGAGCGGTTGGTTGAAGAAGGAGAAAGGCAGTTTCAAGCAGAAGTTCGGGCCATCGGAAAAACACACCACAAGAATTTAGTTCGCTTGCTGGGCTTTTGTGCAGATGGTCCCAAAAGGCTTTTAGTTTATGAGTACATGAGCAATGGTTCCCTTGGAAATCTTCTCTTTGGGGATGTCACACGTCCAGATTGGGATGAGAGAGTACGAATAGCACTGGATGTTGCAAGAGGGATGCTCTATCTCCATGAAGAGTGTGAGGCACCGATTATTCATTGTGATATAAAGCCTCAAAACATTTTGATGGATGAGTTTTGGACTGCCAAAATATCTGATTTTGGGTTAGCAAAACTTCTTATGCCAGATCAAACAAGAACATTCACAGGTGTCAGGGGGACAAGGGGGTACTTAGCCCCAGAATGGCACAAGAACACGCCAATAACAGTGAAGGCAGATATCTATAGCTATGGAATAGTGTTGTTGGAAACTATATGTTGCAGAAGAAACATAGAAGTTAACGTCTCAAAACCAGAGGAGATTCTTCTCTCTGGTTGGGCCTATGAGTGCTTTGTTGCTAGGGAGTTACACAAGCTTGTTCACTGGGAAACAGCAGATAAAAATAACCTGGAAAACATGGTAAAGGTGGCACTTTGGTGCATCCAAGATGAACCTGTTCTCCGGCCATCAATGAAGAGTGTGGTGTTGATGTTAGAAGGGATTATTGATGTAGCAATTCCTCCTTGCCCGACTTCCAATTCCATGTGA	2400	0.4242	MGAIAATMASLMVLLFADSARADTQIQHPRQIPLNSSLYSTSPPTSWPSPSGLFAFGFYPEGSGFVVGIWLVGKNNNHTMVWTANRDDPPLTSNATLQLTMEGKLVLQTQEGQNKLIANATAASASMLDSGNFVLYNKNSSVVWQSFDYPTDTILGDQPLYYGGQLFSSSSETSHSTGRFRLKMQLDGNLVLYPRYTTDTDLDANWASGISDLQGSKYHLYLNKTGSLVIKNGSDGLITCVHDASSSTSNIDNGNKTIYRATVDLDGFFRLYAHDSNDASNSSEVESWPNDDDACTLKGFCGFNSYCTSDDQRPYCKCLPGFDFIDPKQNTLGCTRSFSEAKCGGEKDNTTSFCSMVSLANLVWGSNDRPYAQAKMSQEDCSSSCMKDCNCWAALYQDGVCKKQEPPLRFARRTSKSDSTALLKVGNSTLNGRFGPGQPPQIRSTSKTAIVKIILVTSSFALLLCSSIGISSHLIYKIRVLRYKRLLEIGDLGLNEEVTLRRFSYSELKKATNGFKHELGNGCFGAVYKGVLYKGRSRRLIAVKRLERLVEEGERQFQAEVRAIGKTHHKNLVRLLGFCADGPKRLLVYEYMSNGSLGNLLFGDVTRPDWDERVRIALDVARGMLYLHEECEAPIIHCDIKPQNILMDEFWTAKISDFGLAKLLMPDQTRTFTGVRGTRGYLAPEWHKNTPITVKADIYSYGIVLLETICCRRNIEVNVSKPEEILLSGWAYECFVARELHKLVHWETADKNNLENMVKVALWCIQDEPVLRPSMKSVVLMLEGIIDVAIPPCPTSNSM*	800

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod05g1969	799	Pfam	Protein kinase domain	516	779	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Dod05g1969	799	SMART	blect_4	37	150	IPR001480	-
	Dod05g1969	799	Gene3D	-	30	148	IPR036426	-
	Dod05g1969	799	PIRSF	SRK	2	799	IPR024171	GO:0004674
	Dod05g1969	799	Pfam	D-mannose binding lectin	79	158	IPR001480	-
	Dod05g1969	799	Gene3D	Transferase(Phosphotransferase) domain 1	592	789	-	-
	Dod05g1969	799	PANTHER	G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE LECRK1	24	797	-	-
	Dod05g1969	799	SUPERFAMILY	alpha-D-mannose-specific plant lectins	172	238	IPR036426	-
	Dod05g1969	799	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	635	647	IPR008271	GO:0004672\|GO:0006468
	Dod05g1969	799	Gene3D	Phosphorylase Kinase; domain 1	493	591	-	-
	Dod05g1969	799	SMART	serkin_6	513	786	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Dod05g1969	799	ProSiteProfiles	Bulb-type lectin domain profile.	32	148	IPR001480	-
	Dod05g1969	799	SUPERFAMILY	Protein kinase-like (PK-like)	498	783	IPR011009	-
	Dod05g1969	799	ProSitePatterns	Protein kinases ATP-binding region signature.	519	544	IPR017441	GO:0005524
	Dod05g1969	799	SUPERFAMILY	alpha-D-mannose-specific plant lectins	76	193	IPR036426	-
	Dod05g1969	799	ProSiteProfiles	Bulb-type lectin domain profile.	151	284	IPR001480	-
	Dod05g1969	799	PANTHER	RUST RESISTANCE KINASE LR10-RELATED	24	797	IPR045874	GO:0004672
	Dod05g1969	799	ProSiteProfiles	Protein kinase domain profile.	513	786	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Dod05g1969	799	Gene3D	-	151	282	IPR036426	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod05g1969	Dod-Chr5	45371974	45374913	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod05g1969	502	792	Receptor kinase-like Gene Family	AT5G20050	42.089	2.15e-66	226

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_SD-2b	Dod05g1969		Pkinase	7.5e-45	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod05g1969	-		-	ahf:112707609	1026.16