Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1967 ATGGCTTCCACACCTGTTCTAATCCTCCTGTTCTTCTTGCTATTTGCAAATGAAGTCACATCTGAAACAAATCACTCCAGCATTCGAGTGGGGTCTTGTCTCTCTCCTGAAGGCAATGATACTTTATGGGCATCAAGTTCTGGCCATTTTGCTTTCGGCTTTTACCCACAAGGTAAAAGCTATGCTGTCGGAATATGGCTGGTTACTCAACCTAAGAACACAGTTGTGTGGACTGCTAACCGTGATAGTCCACCATTGTCCTCAAATTCCACATTGAGGCTGAAACGTGACGGGCTAGTTCTCCAGAACGGGGAGGAAGACCCAGAAAATCTCACTCCTTATAATGGCCTTAGTAGTACAAAGCCAGTGGCTTCGGCATCTATGCGGGATTCTGGTAATTTTGTGCTCTATGATAAGGATTTTAATGTTGCCTGGAGTAGCTTTGATAACCCAACCGACACCATATTAGGAGGCCAGAATTTATCCTATCAATCTTCACTGATCTCTAGTAGGTCCGAATCAGAACAGTCGAGTGGACATTTCTATATCACCATCCAGGGTGGTGGAGCGCTCGCTGCTTACCCAGTGAACAGCTCTGGCGAATCTGACGATTGTTATTTGTACACAAAGTATTATTCCGGTTTCGATTCGGCACAGCTTAGTCTTAACATTCAAGGCTCTCTTTGCATAGATTTTGATAATTACTCTCCATGTTTGTTTAATAGCAAGAACCTTGGAAAAAAGTCGCAGAACACAACTACAGTGTACCGCGCAACACTTGGTGAAGACGGGAACTTCAGATTGTATGCACACCACTTTGAGGGCAATACTAACTCAAGTGTGAAATTGCTGTGGGAAGCCCTGGATGATGATAAATGTGAGGTCATGGGGCTTTGTGGCTTGAACAGTTATTGCTCCAACATGACCGGCAAAGCTGTGTGTGTGTGTTATCCTGGTTTCGTCCCCTCCAAAGGCATTGGTAACGATACCTTGTTTCTGGAGTGCAAACAGAACCACAGCAAAGATGATTGTGAAAGTACTGAAGGCCAAACGGTGTTGTATAATATGACTTCCTTGAAGGATATATATTGGCGCGATTCTGCATATTTGGTTGTGCCAATGAAGATGGAAGCTTGTGAGAACTCTTGCCTGGAAGACGATGATTGCGCGGCAGTGTTATACAATACGAGTGATGGCATCTGCAATAAATACAGGCTTCCACTTATGCATGGCAGAAGGTTTCGTGATGCATCAATAGTGGCCCTCTTAAAAATGCCTTCGGGAAATGTCACTAGTCCAACTCCAAACCACATCCCATCTCAAACGGAGCCCAAGGTGCTTGAGGATGACAAGAAAAGTCTTAGAATGATTCTATACTTTACTTTGGGTTCGATTTCATTATTTGGTTTGGTCTTTGTGGTGTATATTTTCTTCACCTATAAGCGTCAAGTTTATAGGTACAAAACCATGTCTAGGAGTGAAGACTTGGGATTTACAGAGGAATACTCCTTGCGTTCGTTTTCTTTTGATGAACTTGTGGAATCAACTGGAGGCTTCACCGAGGAGGTAGGCAGAGGATCTTTTGGAGCAGTTTATAGAGGCGTAATAGTTGGCAGCAATAGAAGGATTGCAGTGAAGAGGCTGGAGAAAGTTGTTGATGAAGGGGAAAGGGAATTCCGAGCTGAAATAACTGCCATTGCTCGAACTCATCACAGGAATCTGGTAAAACTTATTGGCTTTTGTATTGATGGATCTAGGAAGCTTCTTGTTTATGAATATGCCAGCAACGGCTCTCTTGCAAATCTTCTCTTCAAGTCTCTTATGCCTCTGCCTTGGAAAGAAAGAGTGAAAATCGCATTGGATGTGGCTAGAGGAGTCCTGTATTTACACGAGGAGTGTGAAGTTCGAATCATCCACTGCAACATTAAGCCTCAAAACATACTTATGGATGAAGCGTGGACTGCAAAAATATCTGATTTTGGATTTGCAAGACTACTGAAGCCCGAATATTCAAGAATGAACGCTGTGAATGACAAGAGAAGTGGGTATTTGGCACCTGAATGGCAGAAGGATGAATCAGTGTCGGTAAAAGTCGACGTTTATAGTTTCGGTGTAGTGTTATTGGAGATTGCCTGTCGTAGAAGCAATATAGATATGGATGCTTCTTCAACCGAAGAGATACTTCTTTCCAGTTGGGTATATCAATGCTTTGCAACAGGGCAGTTAAATAAGCTTGTTGCATATGATGAAGGTGAAGATGAAGATTGGAAAATACTGGAAAGAATGGTGAAGGTGGGGTTGTGGTGTGTTCAAGATAAGCCATCTCTTCGTCCCTCAATGAAGAATGTCATCTTGATGCTGGAAGGATTGAAAGACATTCCAGTTCCTCCCTCTCCAGCCCTCTTGGGTAAATAA 2415 0.4311 MASTPVLILLFFLLFANEVTSETNHSSIRVGSCLSPEGNDTLWASSSGHFAFGFYPQGKSYAVGIWLVTQPKNTVVWTANRDSPPLSSNSTLRLKRDGLVLQNGEEDPENLTPYNGLSSTKPVASASMRDSGNFVLYDKDFNVAWSSFDNPTDTILGGQNLSYQSSLISSRSESEQSSGHFYITIQGGGALAAYPVNSSGESDDCYLYTKYYSGFDSAQLSLNIQGSLCIDFDNYSPCLFNSKNLGKKSQNTTTVYRATLGEDGNFRLYAHHFEGNTNSSVKLLWEALDDDKCEVMGLCGLNSYCSNMTGKAVCVCYPGFVPSKGIGNDTLFLECKQNHSKDDCESTEGQTVLYNMTSLKDIYWRDSAYLVVPMKMEACENSCLEDDDCAAVLYNTSDGICNKYRLPLMHGRRFRDASIVALLKMPSGNVTSPTPNHIPSQTEPKVLEDDKKSLRMILYFTLGSISLFGLVFVVYIFFTYKRQVYRYKTMSRSEDLGFTEEYSLRSFSFDELVESTGGFTEEVGRGSFGAVYRGVIVGSNRRIAVKRLEKVVDEGEREFRAEITAIARTHHRNLVKLIGFCIDGSRKLLVYEYASNGSLANLLFKSLMPLPWKERVKIALDVARGVLYLHEECEVRIIHCNIKPQNILMDEAWTAKISDFGFARLLKPEYSRMNAVNDKRSGYLAPEWQKDESVSVKVDVYSFGVVLLEIACRRSNIDMDASSTEEILLSSWVYQCFATGQLNKLVAYDEGEDEDWKILERMVKVGLWCVQDKPSLRPSMKNVILMLEGLKDIPVPPSPALLGK* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1967 804 CDD B_lectin 38 151 IPR001480 -
Dod05g1967 804 ProSitePatterns Protein kinases ATP-binding region signature. 523 546 IPR017441 GO:0005524
Dod05g1967 804 Gene3D Transferase(Phosphotransferase) domain 1 594 794 - -
Dod05g1967 804 ProSiteProfiles Bulb-type lectin domain profile. 27 149 IPR001480 -
Dod05g1967 804 Pfam D-mannose binding lectin 74 165 IPR001480 -
Dod05g1967 804 SMART blect_4 34 151 IPR001480 -
Dod05g1967 804 Gene3D Phosphorylase Kinase; domain 1 481 593 - -
Dod05g1967 804 Gene3D - 151 279 IPR036426 -
Dod05g1967 804 Pfam Protein kinase domain 521 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g1967 804 ProSiteProfiles Protein kinase domain profile. 517 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g1967 804 Pfam S-locus glycoprotein domain 249 323 IPR000858 GO:0048544
Dod05g1967 804 SUPERFAMILY alpha-D-mannose-specific plant lectins 62 197 IPR036426 -
Dod05g1967 804 PIRSF SRK 1 803 IPR024171 GO:0004674
Dod05g1967 804 SUPERFAMILY EGF/Laminin 289 323 - -
Dod05g1967 804 Gene3D - 22 150 IPR036426 -
Dod05g1967 804 CDD STKc_IRAK 523 790 - -
Dod05g1967 804 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 2 802 - -
Dod05g1967 804 PANTHER S-RECEPTOR KINASE-LIKE PROTEIN 2 802 - -
Dod05g1967 804 SUPERFAMILY Protein kinase-like (PK-like) 500 788 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1967 Dod-Chr5 45344652 45347066 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1967 435 801 Receptor kinase-like Gene Family AT4G18250 36.316 5.59e-63 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Dod05g1967 Pkinase 2.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1967 - - aip:107630435 1082.01