Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1957 ATGCAGACAGGAGAGGCTGTGAACCCAAAAGCTTACCCTTTGGCAGATGCCCAGTTGACAATAACCATACTGGACCTTGTTCAACAAGCTACCAACTACAAGCAGCTCAAAAAAGGCGCTAATGAAGCTACTAAGACACTGAACAGGGGTATATCTGAGTTCGTTGTCATGGCTGCTGACGCTGAGCCCCTTGAGATTCTTCTCCACCTCCCTCTACTTGCCGAGGATAAAAATGTGCCCTATGTGTTTGTCCCATCAAAACAAGCACTTGGGCGAGCTTGTGGGGTTACCCGGCCAGTGATTGCTTGTTCTGTGACAACCAATGAAGGGAGTCAATTGAAGTCTCAAATACAGCAACTAAAGGATGCTATTGAGAAGCTAATGATTTGA 390 0.4641 MQTGEAVNPKAYPLADAQLTITILDLVQQATNYKQLKKGANEATKTLNRGISEFVVMAADAEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTTNEGSQLKSQIQQLKDAIEKLMI* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1957 129 PRINTS Ribosomal protein L7A/RS6 family signature 71 81 IPR018492 -
Dod05g1957 129 PRINTS Ribosomal protein L7A/RS6 family signature 55 68 IPR018492 -
Dod05g1957 129 PRINTS Ribosomal protein L7A/RS6 family signature 36 50 IPR018492 -
Dod05g1957 129 PRINTS Ribosomal protein L7A/RS6 family signature 81 95 IPR018492 -
Dod05g1957 129 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 4 129 - -
Dod05g1957 129 Gene3D - 1 129 IPR029064 -
Dod05g1957 129 PRINTS High mobility group-like nuclear protein signature 9 22 IPR002415 GO:0003723|GO:0005730
Dod05g1957 129 PRINTS High mobility group-like nuclear protein signature 83 95 IPR002415 GO:0003723|GO:0005730
Dod05g1957 129 PRINTS High mobility group-like nuclear protein signature 39 49 IPR002415 GO:0003723|GO:0005730
Dod05g1957 129 PRINTS High mobility group-like nuclear protein signature 22 37 IPR002415 GO:0003723|GO:0005730
Dod05g1957 129 SUPERFAMILY L30e-like 7 127 IPR029064 -
Dod05g1957 129 PANTHER NHP2-LIKE PROTEIN 1 4 129 - -
Dod05g1957 129 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 24 112 IPR004038 -
Dod05g1957 129 ProSitePatterns Ribosomal protein L7Ae signature. 74 91 IPR004037 GO:0042254|GO:1990904
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1957 Dod-Chr5 45251024 45254329 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1957 36 125 Cytoplasmic Ribosomal Protein Gene Family AT2G47610 28.889 3.68e-06 42.7