Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1956 ATGGATGGGAACAAGGACGATGCCATGAAGTGCCTGAAAATCGGGAAACAGGCATTAGAATCGGGGGATCGAACCCGTGCCATGAAGTTCCTCACGAAGGCTCGCCGCCTCGACCCGTCGCTCCCCGTCGACGACCTCTTGTCGGCGATGGAAGACACCAACGACTGTTCAATCCCTAACACGCACTTCCAAACACCGGCGCCAACCCCCGACGCCCGCTCCACAGCTTCCTCACCAAAATCCTCCTCCACCACCACCGATCAACCCTCACTACGCCGCAGGGCTTCCGCCGCCGAGCCCTCTGCTTCATCCTCATCGTCGCCGTCGTACACGGAGGAGCAAGTCATGGTCGTCAGGGAGATCCGGAGGAAGAAGAACTATTACGAGATTCTAGGGTTGGAGAAGAGTTGCACCGTGGAGGACGTGCGAAAAGCGTACAGAAAACTCTCCCTGAAGGTTCATCCCGATAAGAACAAAGCACCTGGTGCCGAAGAAGCCTTCAAGGCAGTTTCAAAGGCTTTTCAGTGTCTCAGCAACGACGACAACAGAAGAAAGTATGATCTTGCAGGGGAAGATGAGTCTCTCTTCGAGCAGCGGGCCGCTGCTAGGCCCGGCCCGCGGGCCTATGGCGGGTACTATGAGGCTGATGTTGATGCTGAGGAGATTTTCAGAAACTTCTTCTTTGGTGGGATGGCTCCCACAACCCAATTTGGTGGGTTCAGTTTTGGGGCCGGGATGGGCCCGAGGCAAGCGGTTAATGACTCTGGTGGGTTCAATGTTCGGGCCTTGATTCAGTTGCTGCCTGTTCTTACTAATTCTGCTGTTGAATTTCTTACCTTCTTCGGAGCCTGTGTATTCGCTTTCGAGGTCTTACCCTTACGAGCATCGGTTTATTACACCAAAGGGTGTTAA 912 0.5439 MDGNKDDAMKCLKIGKQALESGDRTRAMKFLTKARRLDPSLPVDDLLSAMEDTNDCSIPNTHFQTPAPTPDARSTASSPKSSSTTTDQPSLRRRASAAEPSASSSSSPSYTEEQVMVVREIRRKKNYYEILGLEKSCTVEDVRKAYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDDNRRKYDLAGEDESLFEQRAAARPGPRAYGGYYEADVDAEEIFRNFFFGGMAPTTQFGGFSFGAGMGPRQAVNDSGGFNVRALIQLLPVLTNSAVEFLTFFGACVFAFEVLPLRASVYYTKGC* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1956 303 ProSiteProfiles dnaJ domain profile. 126 190 IPR001623 -
Dod05g1956 303 CDD DnaJ 126 179 IPR001623 -
Dod05g1956 303 ProSitePatterns Nt-dnaJ domain signature. 167 186 IPR018253 -
Dod05g1956 303 PANTHER AT29763P-RELATED 1 280 - -
Dod05g1956 303 SMART dnaj_3 125 182 IPR001623 -
Dod05g1956 303 MobiDBLite consensus disorder prediction 55 113 - -
Dod05g1956 303 PRINTS DnaJ domain signature 146 161 IPR001623 -
Dod05g1956 303 PRINTS DnaJ domain signature 162 182 IPR001623 -
Dod05g1956 303 PRINTS DnaJ domain signature 128 146 IPR001623 -
Dod05g1956 303 PANTHER AT29763P-RELATED 1 280 - -
Dod05g1956 303 Pfam DnaJ domain 126 187 IPR001623 -
Dod05g1956 303 Gene3D DnaJ domain 122 237 IPR036869 -
Dod05g1956 303 MobiDBLite consensus disorder prediction 55 114 - -
Dod05g1956 303 SUPERFAMILY Chaperone J-domain 123 242 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1956 Dod-Chr5 45246436 45247595 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1956 121 187 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 39.437 1.22e-09 56.6