Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1953 ATGTCCCTCAGCTTGTCGAGGCAGACTCACTTTGGATTCGAGGTGGATTTGTTGTATTTTTTCCTGGGAGCGCTAACAGTACAGCTCATGAAAATAAAAGAGTTGCTTGGTATTGTTGGGGTATCTTTCAGTTATTCCCTTATTGTTCTTCGTTGCTCTTTAAATGCCCAACTAGAAAGTGGTCCTGAAATCCAAGATCAACGTCATGCAACCGCGTTCATTGATATTGCTCAGTACTTCAGAACGAACTTCAACTCTAGACATGTATCGTGTTTTGATACTTTTGAAAACTTCGAACCAATTTACAGAAATGTAGCGTGTTTTGTTACTTTTATATCAACTGTGGGTGGACTATTTAGTTTTGCTCTCAGCAGTTCCTTCAACCATCTGTTTGGAGACTGGAACTTGTCGAAAATATGTGTTTATAGTTTCCTAAGTTTTATCTTCGTTGCGGTTTTGTTTGCAAAGGTCGGGCAAAAGCCACATATTATGCAGTTCATATTTTTGCTTCAAAATTTGATGGAGAATCCAGACGCATATACCTTCTCATTTTGGGTTACCATTGTTCTGATGTCCATGTTTATATTGGAGGATGTTAATGCCCGGAAACGTTGCAGTTCGTCCCCTCTTGGTCTTGAAATCCAAGGTCAACATCACGTAATTGTGCAAGTGAATTCGCATTCACAAGCAGCCAACTGTACTGATATTGCTGTTATCATGCCACAACTCAGGGCTTGTATGGAGTCATTTAAGACAAATAACCGGAAGCTGATCGATATACTCTCCATGCATGTGGGAGAATACATTGAAGCCGATGATGACCTCAATAATAAGGACCTTATTCCAATTGACAACAACTTGGTGATCGATACATTGCAGTCGGAAATTGTTAATGACCCCAGCGAAGTCGTGAAGCTCATGGTAACCGCTGGATTCGAGCAGGAGTGTTGCCATGTGTATAGCAGTTGCCGCAGGGAATTTTTAGAGCAGTTCCTGATAGGATTAACGTTGCTACCGCTCGATGGCAGGGACCTTGCCAAGATGGACCCAATGTACCTCGGATTCCATGTTGAGATTTGGACTAAAAGTATAAACATAGCTACAAGGGTACTGTTTCCCAACGAAAAGAGACTCTGTGAGTGCTTCTTCTCAGGGTTCACTTCGGCCGCTGATCTCGCTTTCATGGATGTTTGCAGGGAACTCACGACTAGCCTACTGAATTTCGCCAATTGCTTTGCTGTTGAGAGTAGTGCGCCAAATCTTTTGCCTGTGATCGCTGAAGTGTTCGGTACATTACATGACCTGATTCCAGAGTTCGAATCACTCTTTTCTGAGCCGCCCAATGATTCATTAAGAAATGAAGCAATCAACACTTGCAGGAGATTGGAGAAAGCAATCAAGGGCATTTTCACGGAGTTTGAGAATCGGATTTTTTATGATAGAGCCATGGCAGATTTTCCAGGTGGGCTCTATCAAATTTCTCGTGATGTGATGTACTTCCTCGGTGGTGTTTCCGAAGCTAGGATTTCCCTTGAGAAAGTTTTCCAAGAGAATCCCTTGGATGCTGATAGTGAGGGAACCTCTTCTTCCTTCTCTATGCAGATTGCTAAGATAATGGAGTTGTTAGATAGCCATTTGGAAGTTAAGTCCAAGAACTACAATGACCCTGCTTTGCACTATTTTTCCATGATGAATAATGGGAGGTACATAGAACAAAGGGTAAAAGAGTCCAGTGGATTGCGGAACATTTTGGGCGATGACTGGATCCAAAAACAGGCTGCAAAAGTTCAACAAAACCTTGAAGACTATCAAAGAAGCTCATGGGATAAGGTTCTCGGCCTTTTGAAGCTGGACGGGAATGAACCAATAACAACAGAGTCGATGATAGAGAACCTCAAATTGTTCAACAAGCAGTTTAAGGAGATATGCAGGGTTCAGTCTACATGGTTTGTCCTTGATGAGCAGCTAAGTGAAGAAATAAGAAATCCCTTAGAGAAAATCTTGCCGCCAGCTTTTGGGAATTTCACTAGAAGGTTGCAGACTACTCTTGGTTGGCAGGCTTATGAGTATACGGAGTATTCAGTGTCTGACATTGATGCTCTACTCAACGATTTGTTTCGAGGAAGCCACTGGCGAATCAGTTGCTGGAAGAGAAGGTAA 2160 0.4236 MSLSLSRQTHFGFEVDLLYFFLGALTVQLMKIKELLGIVGVSFSYSLIVLRCSLNAQLESGPEIQDQRHATAFIDIAQYFRTNFNSRHVSCFDTFENFEPIYRNVACFVTFISTVGGLFSFALSSSFNHLFGDWNLSKICVYSFLSFIFVAVLFAKVGQKPHIMQFIFLLQNLMENPDAYTFSFWVTIVLMSMFILEDVNARKRCSSSPLGLEIQGQHHVIVQVNSHSQAANCTDIAVIMPQLRACMESFKTNNRKLIDILSMHVGEYIEADDDLNNKDLIPIDNNLVIDTLQSEIVNDPSEVVKLMVTAGFEQECCHVYSSCRREFLEQFLIGLTLLPLDGRDLAKMDPMYLGFHVEIWTKSINIATRVLFPNEKRLCECFFSGFTSAADLAFMDVCRELTTSLLNFANCFAVESSAPNLLPVIAEVFGTLHDLIPEFESLFSEPPNDSLRNEAINTCRRLEKAIKGIFTEFENRIFYDRAMADFPGGLYQISRDVMYFLGGVSEARISLEKVFQENPLDADSEGTSSSFSMQIAKIMELLDSHLEVKSKNYNDPALHYFSMMNNGRYIEQRVKESSGLRNILGDDWIQKQAAKVQQNLEDYQRSSWDKVLGLLKLDGNEPITTESMIENLKLFNKQFKEICRVQSTWFVLDEQLSEEIRNPLEKILPPAFGNFTRRLQTTLGWQAYEYTEYSVSDIDALLNDLFRGSHWRISCWKRR* 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1953 719 SUPERFAMILY Cullin repeat-like 241 706 IPR016159 -
Dod05g1953 719 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 109 707 - -
Dod05g1953 719 PANTHER EXOCYST COMPLEX PROTEIN EXO70 109 707 IPR004140 GO:0000145|GO:0006887
Dod05g1953 719 Pfam Exo70 exocyst complex subunit 360 704 IPR046364 GO:0000145|GO:0005546|GO:0006887
Dod05g1953 719 Gene3D Exocyst complex component Exo70 221 713 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1953 Dod-Chr5 45220600 45222842 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1953 276 709 EXO70 exocyst subunit family AT5G58430 48.098 8.48e-121 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1953 K07195 - adu:110274018 425.631