Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1952 ATGCCACAACTCACGGCTTGTATGGAGGCATTTAAGTCGAAAAATCAGATGCTGATCGATATGCTTTCCAAGCATGTGGGAGCATACATTAAAGGAGATGTTGATCATATTAAAATTGACAACAACATGGTGATCAATTCGTTGCATTCGGAAATTGTCGATGACCTTGGCGAAGCCGTGAAGCTCATGGTGGCCATTGGATTTGAGAAGGAGTGCTGCGATATGTACAGCAGTTTCCGTAGGGAATTTTTGGAGCAGTTCCTGATAGGATTAAATTTGCCACACGTTGTCAAGATAAAGTATCTGGGATCCTATATTGAGATTTGGATTAAAATTATAAACATAGCTATGAGGATACTGTTTCCCAACGAAAAGAGACTCTGCGAGCGCGACTTTGCTGTTGGGAGCAATTCGCTGGATCTTTGGCCCATAATCCCTAAAGCGTTTGACACATTCCATGGCCAGATTCCAGAGTTTGAATCACTATCTCCTGAGCCGCTCAATGATTCACTTAGAAATGAAGCAATCAACACCTGCAAGAGATTGACAAAATCAACCAAGTGCATTTTCATGGAGCTGGAGGATCAGATTTGCCACGATAGAGCCGAGGCAGATTTTCACGATGTGATGAATTACCTTGTTGGTGTTTCTGAAGCTAGGATTTCCCTTGAGAAAGTTTTCCAAGAGAATCCTTTGGTTGCTAATGACGTGGGAACCTCTTCCTCCTTGGCTTTTTTTATTTTGATTGCTAAGATAATGGAGTGGTTGGATCGCCATTTGGAAGAACCAAGTCCAAAATCCATTCTGGACCCTACTATGGGCTATCTTTTCATGATGAATAATCTGAGGTACATACAACAAAGGGTAAAAGAGTCCAATGATTTGGGTAACATTTTGGGTGACGATTGGATCCAAAAGCGCAATGCAAAAGTCCAAAAAAACCTCGAGGACTATATGTTTGAGTACAATTTTGGTTGTAACATCTTTTAA 990 0.4111 MPQLTACMEAFKSKNQMLIDMLSKHVGAYIKGDVDHIKIDNNMVINSLHSEIVDDLGEAVKLMVAIGFEKECCDMYSSFRREFLEQFLIGLNLPHVVKIKYLGSYIEIWIKIINIAMRILFPNEKRLCERDFAVGSNSLDLWPIIPKAFDTFHGQIPEFESLSPEPLNDSLRNEAINTCKRLTKSTKCIFMELEDQICHDRAEADFHDVMNYLVGVSEARISLEKVFQENPLVANDVGTSSSLAFFILIAKIMEWLDRHLEEPSPKSILDPTMGYLFMMNNLRYIQQRVKESNDLGNILGDDWIQKRNAKVQKNLEDYMFEYNFGCNIF* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1952 329 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 41 132 - -
Dod05g1952 329 SUPERFAMILY Cullin repeat-like 19 320 IPR016159 -
Dod05g1952 329 Pfam Exo70 exocyst complex subunit 149 318 IPR046364 GO:0000145|GO:0005546|GO:0006887
Dod05g1952 329 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 148 319 - -
Dod05g1952 329 PANTHER EXOCYST COMPLEX PROTEIN EXO70 41 132 IPR004140 GO:0000145|GO:0006887
Dod05g1952 329 PANTHER EXOCYST COMPLEX PROTEIN EXO70 148 319 IPR004140 GO:0000145|GO:0006887
Dod05g1952 329 Gene3D Exocyst complex component Exo70 1 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1952 Dod-Chr5 45211643 45212994 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1952 40 318 EXO70 exocyst subunit family AT5G58430 36.728 9.68e-46 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1952 K07195 - aip:107607007 225.713