LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod05g1937	ATGGCTACTCTGTGGAAGAGGCTTGCAAGAGCCACCACCACCCCCATCGCGTTCGCCAATGCCTTCACTCGCCAATCCAAATCCTCTTCCACTCATCACTCCAATTTCCGCATACCGTTCTCTGCCGTCGCCGCCGTCTCCGGCGGAGCCTCCTTCTTTTACGTACTCTCCTGTCCTAACTTGGTTCATTCAGAGCAAGCAGAAGAAGGGGAAAGTAAAAATATTGCACTCAACCCAGATAAATGGATCGAATTTAAGTTGCAAGACACTGCCAGGGTCAGTCACAATACCCAATTATTCAGGTTTTCGTTTGATCCCAACAAGAAGTTGGGTTTGGACATTGCTTCTTGCATTCTTACTAGGGCTCCAATGGGACAAGACGCGGAAGGAAAACCAAAATATGTCATACGTCCCTATACTCCTATATCAGATCCAGAATCCAAAGGATATTTTGATTTGTTAATCAAGGTGTATCCTGAAGGAAAAATGAGCCAGCATTTTGCAAGCTTGAAACCAGGTGATGTTGTTGAAGTGAAAGGGCCCATTGAAAAGCTCAGATATACCCCTAATATGAAGAAGCATATTGGTATGATTGCTGGTGGCACTGGAATCACTCCAATGCTTCAAGTCATTGAGGCAATACTGAAGAATCCTGATGACAAAACCCAGATATCATTGCTGTATGGCAATGTCTCCCCAGATGACATACTGCTTAAACAGAAGCTTGACATTCTAGCCGCAACACACCCTAACTTAAAGGTATTCTACACTGTAGATAATCCAACTAAAAATTGGAGAGGAGGTGCGGGTTACATATCAAAGGATACAGTTGTCAAAGGCTTACCTGCTCCTAGTGATGATACTCTTATACTTGTGTGTGGCCCCCCTGGGATGATGATACACGTATCTGGTGAAAAGGCCAAAGATTGGACGCAAGGAGAGGTTTCTGGCATACTCAAAGAAGCCGGGTACACCGAACAAATGGTTTACAAATTCTGA	999	0.4454	MATLWKRLARATTTPIAFANAFTRQSKSSSTHHSNFRIPFSAVAAVSGGASFFYVLSCPNLVHSEQAEEGESKNIALNPDKWIEFKLQDTARVSHNTQLFRFSFDPNKKLGLDIASCILTRAPMGQDAEGKPKYVIRPYTPISDPESKGYFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYTPNMKKHIGMIAGGTGITPMLQVIEAILKNPDDKTQISLLYGNVSPDDILLKQKLDILAATHPNLKVFYTVDNPTKNWRGGAGYISKDTVVKGLPAPSDDTLILVCGPPGMMIHVSGEKAKDWTQGEVSGILKEAGYTEQMVYKF*	333

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod05g1937	332	SUPERFAMILY	Riboflavin synthase domain-like	75	190	IPR017938	-
	Dod05g1937	332	ProSiteProfiles	Ferredoxin reductase-type FAD binding domain profile.	80	188	IPR017927	GO:0016491
	Dod05g1937	332	CDD	cyt_b5_reduct_like	85	332	-	-
	Dod05g1937	332	Gene3D	Translation factors	75	178	-	-
	Dod05g1937	332	Pfam	Oxidoreductase FAD-binding domain	85	187	IPR008333	-
	Dod05g1937	332	PRINTS	Cytochrome B5 reductase signature	234	245	-	-
	Dod05g1937	332	PRINTS	Cytochrome B5 reductase signature	196	215	-	-
	Dod05g1937	332	PRINTS	Cytochrome B5 reductase signature	137	144	-	-
	Dod05g1937	332	PRINTS	Cytochrome B5 reductase signature	289	297	-	-
	Dod05g1937	332	PRINTS	Cytochrome B5 reductase signature	173	187	-	-
	Dod05g1937	332	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	196	215	IPR001709	GO:0016491
	Dod05g1937	332	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	234	245	IPR001709	GO:0016491
	Dod05g1937	332	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	137	144	IPR001709	GO:0016491
	Dod05g1937	332	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	289	297	IPR001709	GO:0016491
	Dod05g1937	332	PANTHER	NADH-CYTOCHROME B5 REDUCTASE	34	332	IPR001834	GO:0016491
	Dod05g1937	332	PANTHER	NADH-CYTOCHROME B5 REDUCTASE-LIKE	34	332	-	-
	Dod05g1937	332	Pfam	Oxidoreductase NAD-binding domain	197	302	IPR001433	GO:0016491
	Dod05g1937	332	SUPERFAMILY	Ferredoxin reductase-like, C-terminal NADP-linked domain	174	330	IPR039261	-
	Dod05g1937	332	Gene3D	-	179	332	IPR039261	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod05g1937	Dod-Chr5	45052322	45058424	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod05g1937	71	332	NADPH P450 reductases	AT5G17770	40.530	2.48e-63	201

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod05g1937	K00326		-	gmx:100781191	549.28