Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1928 ATGCTAGCTACCAATAGCAGCAAAATCAAAAGGCCAGTGCATATAAGACCCCCAATTCACAAAGCCAATATGAAACCCACACACACAAAACTCCCACTTCAAAATAACCTCACACACAAATATATACACACACATTTATGTTACCTTGCACCTACCATGGCCACCAACAACACACCTTTTAGAGATGAGCCTGACTACGACAGCAGCTCCTCCTCCGCCACCACCACCGTGCCGGAGTCTAGCCGGAGCTGGATGAGCAACCTCAGCTTCAGCAGCCTCCGGCGCCGGAGCTCCGTCTCCGTTTGTTCCACCACCACAGACACATCTTTGTGCTTCGCCTCACAAGCCAAGCCACATAAGGCGAACCAAGCTGCATGGGAGGCCATGCAGCGGCTCCGGAGCGACAAGGGCCGTGTCGGGCTCGACCACTTCCGCCTCCTACGGCGGCTAGGGAGCGGCGACATAGGGAACGTGTACCTTTGCCAGATAAGGAACCCTGTGGTGGGGTTGCCGCAGTGTTTCTATGCCATGAAGGTGGTGGATAGAGAAGCTCTTGCTATAAGGAAGAAGCTGCAGAGGGCGGAAATGGAGAAGGAGATTCTAGGGATGCTTGATCACCCTTTCTTGCCAACTTTGTACACTGAGTTTGAAGCATCTCATTACTCTTGCTTGGTTATGGAGTTCTGTCCAGGTGGTGACTTGTATGCTGCTCGCCAACGCCAACGCGGGAAGCGCTTTAGCATTGCATCTGCTAAGTTTTATGCAGCTGAGACACTGTTGGCTATAGAGTATCTGCACATGATGGGGATAGTGTACAGGGATTTGAAGCCAGAGAATGTGCTAGTAAGGGAGGACGGGCACATCATGCTGTCGGATTTTGATCTCTCTCTCAAATGTGACGTTGTTCCGAAGCTCTTGAGGACTAAAACCAGATTGGAACGCAGTGTCAAGAGCACAAAGAGATCTTCACCAGCCTGCACTGCCCCCATGCAGCCTGTGCTATCTTGCTTCTTAGCATCAAGCAAGAAAAAGAGATCACCAACCGTGACAACAGTCATAAGAGAAAACATTGAAGGCCTCGAAGAACTTGACCCTGAGCTTGTAGCAGAACCAATTGATGCAAGGTCCAAGTCATTTGTAGGGACACATGAGTACTTGGCGCCTGAAGTAATCTTGGGGCAAGGTCATGGCAGTGCAGTGGATTGGTGGACATTTGGGGTGTTCTTGTATGAGATGTTATATGGTAGAACACCTTTCAAAGGTGAGAACAATGAGAGAACACTTGTGAACATCTTGAAGCAGCCATTGGCTTTCCCTAGGATTGCAGTTAGCAGCAGCAAGGAGTTTGAAGAGATGGTGAAGGTTCAAGACCTTATAAGCAAGCTCTTGGTGAAGAACCCCAATAAGAGGATTGGAAGCTGCATGGGTTCTGTTGAGATCAAGAGGCATGAGTTCTTCAAAGGTGTAAATTGGGCTTTGATTAGATCAGTTAGACCCCCTGAGGTCCCTAATGATGTGAACAATAAGATTAGGAGTAGGGTTTTGGTACCAAGACTAAGCAAGAAAGACAGGGAACAACCATATCAGCTTAGCCATCGTTTTGAATACTTCTAA 1614 0.4857 MLATNSSKIKRPVHIRPPIHKANMKPTHTKLPLQNNLTHKYIHTHLCYLAPTMATNNTPFRDEPDYDSSSSSATTTVPESSRSWMSNLSFSSLRRRSSVSVCSTTTDTSLCFASQAKPHKANQAAWEAMQRLRSDKGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPVVGLPQCFYAMKVVDREALAIRKKLQRAEMEKEILGMLDHPFLPTLYTEFEASHYSCLVMEFCPGGDLYAARQRQRGKRFSIASAKFYAAETLLAIEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSLKCDVVPKLLRTKTRLERSVKSTKRSSPACTAPMQPVLSCFLASSKKKRSPTVTTVIRENIEGLEELDPELVAEPIDARSKSFVGTHEYLAPEVILGQGHGSAVDWWTFGVFLYEMLYGRTPFKGENNERTLVNILKQPLAFPRIAVSSSKEFEEMVKVQDLISKLLVKNPNKRIGSCMGSVEIKRHEFFKGVNWALIRSVRPPEVPNDVNNKIRSRVLVPRLSKKDREQPYQLSHRFEYF* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1928 537 Gene3D Transferase(Phosphotransferase) domain 1 373 504 - -
Dod05g1928 537 Gene3D Phosphorylase Kinase; domain 1 142 228 - -
Dod05g1928 537 SMART serkin_6 144 486 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g1928 537 PANTHER FLIPPASE KINASE 1-RELATED 60 537 - -
Dod05g1928 537 MobiDBLite consensus disorder prediction 59 78 - -
Dod05g1928 537 CDD STKc_phototropin_like 142 503 - -
Dod05g1928 537 PANTHER PROTEIN KINASE PINOID 2 60 537 - -
Dod05g1928 537 ProSitePatterns Serine/Threonine protein kinases active-site signature. 270 282 IPR008271 GO:0004672|GO:0006468
Dod05g1928 537 SUPERFAMILY Protein kinase-like (PK-like) 128 504 IPR011009 -
Dod05g1928 537 Coils Coil 177 197 - -
Dod05g1928 537 Pfam Protein kinase domain 376 486 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g1928 537 Pfam Protein kinase domain 145 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g1928 537 ProSiteProfiles Protein kinase domain profile. 144 486 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g1928 537 Gene3D Transferase(Phosphotransferase) domain 1 229 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1928 Dod-Chr5 44961723 44963722 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1928 53 537 AGC Kinase Gene Family AT2G26700 58.442 0.0 594
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Dod05g1928 Pkinase 4.1e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1928 K08286 - gmx:100777988 809.29