Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1923 ATGGAGGACAGAAAAGCAAACACAATCGCTGTTGTATCAGTGATTGCACTGATCATAGTCATAATCGTTGCTCGTGTCTCCTTGAAGCTCTCAAGGGCTTTCTTCCTCATATGTGGTGCTGATGTTGCTGTGATCCTTGCTGTCTTCTCTTGTCTCCTAATCAGGAACCGTTACCACCGAAGGAGGAGGTTGTTGGAGTCACAGCTGAGTTCAGAAGGTAGAGAGCTTCGAATAGAGTACAGTTTCTTGAGGAAAGTTGCTGGGGTCCCAACAAAGTTTCGGTACAAGGAGCTTGAGGAAGCAACCGATGGTTTTCAAGCACTTTTGGGAAAAGGTTCTTCTGCTTCGGTGTTCAAAGGCATTCTTAATGATGGAACTTCTGTTGCTGTGAAGAGAATTGATGGGGAGGAAAGAGGGGACAGGGAGTTCAGATCAGAAGTTGCAGCTATTGCTAGTGTTCAACATGTGAACCTTGTGAGGCTATTTGGCTATTGTAATGCTCCTTCAGCACCTAGGTACCTTGTTTATGAGTATATCCCAAACGGTTCTTTGGATTGTTGGATTTTCCAATCAAGGGGGGACACTAATAGGCGCCGTGGAGGGTGCTTGCCTTGGAACTTGAGGTACAAAGTTTCCATTGATGTTGCAAAAGGATTGAGTTACCTTCACCATGATTGCAGATCAAGGGTCTTGCACCTTGATGTGAAGCCAGAGAATATACTCTTGGATGAGAATTATAGAGCTCTTGTTTCTGATTTCGGTCTCTCAAAGCTTGTTGGCAAGGATGTGAGCCAAGTCATGACAACAATGAGGGGAACAAGAGGGTACTTAGCCCCTGAATGGCTCTTGGAGAGAGGGGTTTCTGAGAAAACTGATATCTATAGTTATGGGATGGTTCTGTTGGAGATAATTGGGGGGAGGAGGAATGTGTCCAAGGTAGAGGATCCAAAGGACAAGTCCAAGAAGAAGTTGCAATTCTTCCCCAAGATTGTGAATGAGAAAGTGAGGGAAGGGAAATTTATGGAGATTGTTGACAGTAGGCTAGTGGAGAGAGGGGGTGTTGATGAGAGTGAGGTGATTAGATTGGTGTATGTTGCTTTGTGGTGCATACAAGAGAGGCCAAGGTTGAGGCCTAGTATGGCACAAGTTGTTGACATGCTTGAAGGGCGTGTGAGGGTTGATGAGCCCCCAGATACAAGAATGATGCTTGTCGATTTGCTAGATGAAGAACCTGCAGATCAGAATCGTTTGGCAAGGTTATTGACCACTTTGTCTAGCCATGAGGAATGTACATCTACATACTCTTTCGGAACCGCAGCCACTATTCTATCTGGCAGATAG 1341 0.4526 MEDRKANTIAVVSVIALIIVIIVARVSLKLSRAFFLICGADVAVILAVFSCLLIRNRYHRRRRLLESQLSSEGRELRIEYSFLRKVAGVPTKFRYKELEEATDGFQALLGKGSSASVFKGILNDGTSVAVKRIDGEERGDREFRSEVAAIASVQHVNLVRLFGYCNAPSAPRYLVYEYIPNGSLDCWIFQSRGDTNRRRGGCLPWNLRYKVSIDVAKGLSYLHHDCRSRVLHLDVKPENILLDENYRALVSDFGLSKLVGKDVSQVMTTMRGTRGYLAPEWLLERGVSEKTDIYSYGMVLLEIIGGRRNVSKVEDPKDKSKKKLQFFPKIVNEKVREGKFMEIVDSRLVERGGVDESEVIRLVYVALWCIQERPRLRPSMAQVVDMLEGRVRVDEPPDTRMMLVDLLDEEPADQNRLARLLTTLSSHEECTSTYSFGTAATILSGR* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1923 446 ProSitePatterns Protein kinases ATP-binding region signature. 109 131 IPR017441 GO:0005524
Dod05g1923 446 PANTHER RECEPTOR-LIKE KINASE 1 446 - -
Dod05g1923 446 Gene3D Phosphorylase Kinase; domain 1 69 178 - -
Dod05g1923 446 Pfam Protein kinase domain 108 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g1923 446 SUPERFAMILY Protein kinase-like (PK-like) 85 388 IPR011009 -
Dod05g1923 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 230 242 IPR008271 GO:0004672|GO:0006468
Dod05g1923 446 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 1 446 - -
Dod05g1923 446 SMART serkin_6 103 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g1923 446 Gene3D Transferase(Phosphotransferase) domain 1 179 429 - -
Dod05g1923 446 ProSiteProfiles Protein kinase domain profile. 103 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1923 Dod-Chr5 44927030 44928831 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1923 1 399 Receptor kinase-like Gene Family AT5G20050 67.830 0.0 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Dod05g1923 Pkinase 2.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1923 - - gmx:100779485 723.391