Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1916 ATGGTGTCCATGTCCATGTCCATGTGCGGGCAAGAAGAGCTAGAACTGTCACGGGATGGCAGCCACTATAGCCTCTCCACAGGGATACTGCCTTCTCTTGGAGCCAGAAGTAATCGCAGAGTCAAGCTCAAGCCCTTCATTATATCTCCCTATGAACGCCATTACAGGATATGGGAAACTTTCCTTGTCATTCTGGTTGTCTACACTGCTTGGGTATCTCCTTTCGAGTTTGGTTTCCTTAAGAAACCACAAGGACCACTCTCCATTACGGATAATGTTGTCAATGCATTCTTTGCTGTGGATATAGTCCTCACTTTCTTTGTGGCTTACATGGACAAAGCTACCTATTTGTTGGTTGATAATTCGAAACAAATCGCTTGGAAATACATAAGAACTTGGTTTGCCTTTGATGTTGTCTCTATCATTCCTTCGGAGCTTGTTAGAAAGATATCACCTGCACCTCTCCAAACATATGGATTATTCAACATGCTCCGGCTCTGGCGTCTTCGAAGAGTTAGTGCTTTGTTCTCAAGGCTGGAGAAGGACAAAAACTATAACTATTTCTGGGTTCGGTGTGCTAAGCTTATTTGTGTTACCCTTTTTGCTGTCCATTGTGCGGCGTGTTTCTACTATCTTATTGCGGCACGTTACCATGATCCCCAAAAGACATGGATTGGGGCATCAATGGGTGATAATTTTCTTCACCGGAGCTTGTGGACAAGATATGTGACATCTATTTATTGGTCTATTACCACTTTGACTACCGTTGGCTACGGAGATCTGCATCCAGTGAATTCAAGGGAGATGATCTTTGACATTTTTTATATGCTCTTCAACTTGGGATTAACGGCGTATTTGATTGGTAATATGACTAATTTAGTTGTCCACGGAACGAGTCGAACCAGAAAATTTAGAGACACCATACAAGCTGCCTCAAGTTTTGCTCAAAGGAACCAATTGCCTGTACGTTTACAAGATCAGATGCTTGCTCATTTGTGTTTAAAGTTTAGAACAGACTCAGAGGGATTACAGCAGCAAGAGACACTTGATTCTCTCCCTAAAGCCATCAGATCAAGCATTTCACATTATCTTTTTTACTCTCTTGTGGATAAGGTCTACTTGTTTCGAGGGGTTTCAAATGATTTACTGTTTCAATTGGTTTCGGAAATGAAAGCGGAGTATTTTCCACCCAAAGAAGATGTTATCTTGCAGAACGAAGCTCCTACTGACTTTTACATACTAGTCACTGGTGCTGTGGACTTGGTAGTTCTCAAGAACGGGACTGAACAGGTTGTTGGAGAGGCAAAAACGGGTGATCTTTTTGGTGAAATTGGCGTGCTTTGCTACAAGCCACAACTCTTCACTGTTCGAACAAAGCGATTAAGCCAGCTGCTGAGGCTAAATCGTACTGCTTTCCTGAATATTGTTCAGGCCAATATAGGAGATGGAACCATAATCATGAACAATCTTCTTCAGCATTTGAAAGAGCTCAATGACCCAATCATGGAAGGAGTTTTGGTGGAGACCGAAAACATGTTAGCTCGTGGTAGAATGGACCTACCGGTTAGTTTATGCTTTGCAGCAGCAAGAGGTGATGACTTGTTGCTGCATCATTTGTTGAAACGAGGTTTAGATCCAAATGAATCCGACAACAATGGAAGGACAGCTTTGCATATTGCAACATCTAAAGGAAGTGAGAATTGTGTCACGCTTTTATTGGATGATGGAGCGGATCCTAACATTAGAGATTCTGAAGGCAATGTACCCCTATGGGAAGCTATACTAGGTGGACACGAATCATTGATCAAGTTGTTGGTAGAAAATGGTGCTAACTTGCGATATGGTGACGTGGGTCAATTCGTATGCACTGCTGTTGAACAAAACAACCTCAACTTGATCAAGGATATAATACGCTATGGAGGAGATGTCACGCTGCCTAGTTCCAACACTGGGATTACAGCTCTGCATGTTGCAGTTTCCGAGGACAACATGGAAATTGTTAAATTCCTTTTAGGACGCGGGGCTGACATTGATAAGCCAGACAAGAATGGTTGGACCCCAAGAGATCTAGCAGACCAGCAGGGACATCAAGACATTAAGACTCTTTTTGAGTCCATTGGCGAGTCTAAGACTCAACCTTTGACCTCTATTCCAGAGAGGCAAAGTAAGATAAGGTACCTAGGGCGATTTACAAGTGAGCCAACAATGCATTTGCCCCATGAAGGTTCATTTCCGGGAACAGATGGGTCTTGGAACCAAAGCCGTCCAAGGCGTAGAAGCAATAACTTTCATAACTCACTCTTTGGGATAATGTCTGCAGCACACAAAGGTGAAAAGGACATGCTTTTCTCGGTTAACATCAACAATAATGAAAGGAATGGTATGAAAGATCGAGTTTGTCCAACTAGAGTTATAATTAGTTGTCCTGAAAAGGGTGAGGCTGCTGGGAAGCTTGTGTTACTACCTGGAAGCTTTAAGGAGCTACTTGAGATTGGGGATAAGAAATTTGGTGTCTCTCCTGCTAAGGTTGTCTGCAAAGATGGAGCTGAAATTGAAGATATAGAGGTGATTAGAGATGGTGACCATCTTGTATTTGTCAGTGTTGGCCAAGAGTCCAATTGCCCTAATCTCCCAAATGGTGTGCTTCAATAG 2652 0.4272 MVSMSMSMCGQEELELSRDGSHYSLSTGILPSLGARSNRRVKLKPFIISPYERHYRIWETFLVILVVYTAWVSPFEFGFLKKPQGPLSITDNVVNAFFAVDIVLTFFVAYMDKATYLLVDNSKQIAWKYIRTWFAFDVVSIIPSELVRKISPAPLQTYGLFNMLRLWRLRRVSALFSRLEKDKNYNYFWVRCAKLICVTLFAVHCAACFYYLIAARYHDPQKTWIGASMGDNFLHRSLWTRYVTSIYWSITTLTTVGYGDLHPVNSREMIFDIFYMLFNLGLTAYLIGNMTNLVVHGTSRTRKFRDTIQAASSFAQRNQLPVRLQDQMLAHLCLKFRTDSEGLQQQETLDSLPKAIRSSISHYLFYSLVDKVYLFRGVSNDLLFQLVSEMKAEYFPPKEDVILQNEAPTDFYILVTGAVDLVVLKNGTEQVVGEAKTGDLFGEIGVLCYKPQLFTVRTKRLSQLLRLNRTAFLNIVQANIGDGTIIMNNLLQHLKELNDPIMEGVLVETENMLARGRMDLPVSLCFAAARGDDLLLHHLLKRGLDPNESDNNGRTALHIATSKGSENCVTLLLDDGADPNIRDSEGNVPLWEAILGGHESLIKLLVENGANLRYGDVGQFVCTAVEQNNLNLIKDIIRYGGDVTLPSSNTGITALHVAVSEDNMEIVKFLLGRGADIDKPDKNGWTPRDLADQQGHQDIKTLFESIGESKTQPLTSIPERQSKIRYLGRFTSEPTMHLPHEGSFPGTDGSWNQSRPRRRSNNFHNSLFGIMSAAHKGEKDMLFSVNINNNERNGMKDRVCPTRVIISCPEKGEAAGKLVLLPGSFKELLEIGDKKFGVSPAKVVCKDGAEIEDIEVIRDGDHLVFVSVGQESNCPNLPNGVLQ* 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1916 883 ProSiteProfiles Ankyrin repeat region circular profile. 552 583 - -
Dod05g1916 883 MobiDBLite consensus disorder prediction 736 757 - -
Dod05g1916 883 SUPERFAMILY cAMP-binding domain-like 299 494 IPR018490 -
Dod05g1916 883 SUPERFAMILY Ankyrin repeat 523 705 IPR036770 -
Dod05g1916 883 ProSiteProfiles Ankyrin repeat region circular profile. 585 612 - -
Dod05g1916 883 PANTHER K+ TRANSPORTER 1-RELATED 5 868 - -
Dod05g1916 883 ProSiteProfiles KHA domain profile. 803 883 IPR021789 -
Dod05g1916 883 SMART cnmp_10 374 491 IPR000595 -
Dod05g1916 883 ProSiteProfiles Ankyrin repeat profile. 552 584 IPR002110 GO:0005515
Dod05g1916 883 Pfam Cyclic nucleotide-binding domain 394 478 IPR000595 -
Dod05g1916 883 ProSiteProfiles Ankyrin repeat profile. 585 617 IPR002110 GO:0005515
Dod05g1916 883 Gene3D - 520 705 IPR036770 -
Dod05g1916 883 PRINTS Ankyrin repeat signature 666 680 IPR002110 GO:0005515
Dod05g1916 883 PRINTS Ankyrin repeat signature 553 568 IPR002110 GO:0005515
Dod05g1916 883 PRINTS EAG/ELK/ERG potassium channel family signature 286 295 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dod05g1916 883 PRINTS EAG/ELK/ERG potassium channel family signature 68 75 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dod05g1916 883 PRINTS EAG/ELK/ERG potassium channel family signature 102 111 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dod05g1916 883 PRINTS EAG/ELK/ERG potassium channel family signature 268 279 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dod05g1916 883 PRINTS EAG/ELK/ERG potassium channel family signature 91 101 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dod05g1916 883 PRINTS EAG/ELK/ERG potassium channel family signature 242 259 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dod05g1916 883 ProSiteProfiles Ankyrin repeat region circular profile. 650 682 - -
Dod05g1916 883 ProSiteProfiles Ankyrin repeat profile. 650 682 IPR002110 GO:0005515
Dod05g1916 883 Pfam Ion transport protein 56 301 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Dod05g1916 883 ProSiteProfiles cAMP/cGMP binding motif profile. 374 476 IPR000595 -
Dod05g1916 883 Gene3D Jelly Rolls 339 498 IPR014710 -
Dod05g1916 883 PANTHER POTASSIUM CHANNEL AKT1 5 868 IPR045319 GO:0005249|GO:0006813
Dod05g1916 883 Gene3D - 57 295 - -
Dod05g1916 883 SUPERFAMILY Voltage-gated potassium channels 50 295 - -
Dod05g1916 883 CDD CAP_ED 374 479 IPR000595 -
Dod05g1916 883 SMART ANK_2a 519 548 IPR002110 GO:0005515
Dod05g1916 883 SMART ANK_2a 616 645 IPR002110 GO:0005515
Dod05g1916 883 SMART ANK_2a 552 581 IPR002110 GO:0005515
Dod05g1916 883 SMART ANK_2a 650 679 IPR002110 GO:0005515
Dod05g1916 883 SMART ANK_2a 585 614 IPR002110 GO:0005515
Dod05g1916 883 Pfam KHA, dimerisation domain of potassium ion channel 803 865 IPR021789 -
Dod05g1916 883 Pfam Ankyrin repeats (3 copies) 624 708 IPR002110 GO:0005515
Dod05g1916 883 Pfam Ankyrin repeats (3 copies) 524 612 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1916 Dod-Chr5 44786899 44793780 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1916 15 865 Ion Channels AT2G25600 65.344 0.0 1125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1916 K21867 - gmx:100819491 1487.63