Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1914 ATGTTTCTTGTTATCCTAGCTATATACACTGCTTGCATATCTCCCATTGAAATTGGATTCTTTGAAGAACTAGGAGCAACACTATCTATCATAGACTATATGGTGAATGGACTGTTCACTATAAATATAGTTCTAACCTTTTTTGTGGCATACATTGACAAGAGTGCTTACATGTTGGTTGACAACAAAAAGAAAATTGCCAAAAGATATGTTACCCTTCTATCTGTTCATTGTGCTGGATGTGTTTATTATCGTATTGCGGCAAGTTACCGTAATCCAAGAAGGACATGGATTGGAGCATCAATGAATGATTTTCTCCAGCAAAGCCTGTGGACAAGATATGTCACGGCTATCTACTGGTCCATGACCACGTTATCCACTGTTGGTTACGGCGATTTTCATCCAATGAACTCAATGGAAATGATTGTTGACATATTTTTTATGCTCTTCAATCTTGGACTAGGGTCATATTTGATCGGTAATATGACCAATTTGGTTGTCCACGCAGAAAGTCGAACAAGAAAATTTAGAGACACAACCCAGATACTTTCAAGGTTTGCTCGAAGGAACGGATTGCCTACTCCTTTGCAAGACAGTGTGCATAAACATTTGCACTTGAAGTTTAGAACCGACTTGGAAGGATTGAAACAGCAAGAGGCTCTTGATTCTCTCCCTCAAGCCATCAGATCGAGTATCTTACAACATCTTTTTTATTCTCTGCTCGATAATGTCTATTTATTCCGTGGAGTTTCAAGTGACTTACTTTCTCAATTGGTCTTGGAAGCCAAAGTTCAGTATTTTCCACCCAAGGAAGATGTTATCTTGCAAAATGATGCCCCAACCAATTTCTACATATTGGTCACCGGTGCTGTGCTACCTCCTGATGACCCAGCTTATGAAGATCTCCGTGATGAGATTGGTGTTGTTGGACATGCATCTGCCGGTGATCTTTGTGGGGAAATTGGTGTGCTTTCCAACAAGCCACAACACTTCAGAGTTCAGACAAGGCAATTGAGCCAGCTATTGAGACTAGATAGCAGTACATTCTTCAAGATTCTTCAAACCAATCGTAGAAATGGAGCTATGATCTTGACTAATTTTCTTGGATATTTGATGAAGCAAAGTAACCCAATCATGAAGAGAGCTTTGGATGAGATTGAGTGGAAATTAGCTTGTGGAAAGGTGGAGATACCGGTGGATTTATCATTTGCAATAAAAGGAAACTATAATAAGTTGTTGATTCGTTTGTTGAAAGACGGATTGGATCCAAACGAACCTGATATCCATGGAAGCATGGCTTTGCATATAGCAGCGTCAGCAGGGAATGAGCAAAGTGTCCCGATTTTGATAGAGCATGGGGCGGATCCCGACCTCTTAGACAAAGATAATTATACCGCTGCAGACCTAGCCTCTATTCACAACCATGATGGCGTTAAAACCATTATCGAGTCTATTAAGAAGTCTAAGGCTGAAAGCTCTTCCCAGCAAACACATAGGACAAGAGTGATAATTAGTTGCCCTGAAAAGGGTGATCCTGAGAAGCATGTGTTATTACCGGGAAGCTTGGAAGAGCTTCTTGAACTCGGACGTAAGAAATATGGTGTCCGTCCGGCTAAGATATGCCTTCAAGGTTTCACGGCTTCAATTGAAGATATAAATGTGATTAAAAAAGACGACCATCTTGTGTTTGTCATTGTTGATCAATCTTCCAACAGCCAAGATGGGGTTGAAATTGAAGATAGAGATGTGCTTGGAGATGATGACTGTTTTGTGTCTTGCAGTTCTGGCCATGAGTTCAGCATATAG 1806 0.4053 MFLVILAIYTACISPIEIGFFEELGATLSIIDYMVNGLFTINIVLTFFVAYIDKSAYMLVDNKKKIAKRYVTLLSVHCAGCVYYRIAASYRNPRRTWIGASMNDFLQQSLWTRYVTAIYWSMTTLSTVGYGDFHPMNSMEMIVDIFFMLFNLGLGSYLIGNMTNLVVHAESRTRKFRDTTQILSRFARRNGLPTPLQDSVHKHLHLKFRTDLEGLKQQEALDSLPQAIRSSILQHLFYSLLDNVYLFRGVSSDLLSQLVLEAKVQYFPPKEDVILQNDAPTNFYILVTGAVLPPDDPAYEDLRDEIGVVGHASAGDLCGEIGVLSNKPQHFRVQTRQLSQLLRLDSSTFFKILQTNRRNGAMILTNFLGYLMKQSNPIMKRALDEIEWKLACGKVEIPVDLSFAIKGNYNKLLIRLLKDGLDPNEPDIHGSMALHIAASAGNEQSVPILIEHGADPDLLDKDNYTAADLASIHNHDGVKTIIESIKKSKAESSSQQTHRTRVIISCPEKGDPEKHVLLPGSLEELLELGRKKYGVRPAKICLQGFTASIEDINVIKKDDHLVFVIVDQSSNSQDGVEIEDRDVLGDDDCFVSCSSGHEFSI* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1914 601 ProSiteProfiles cAMP/cGMP binding motif profile. 246 370 IPR000595 -
Dod05g1914 601 Gene3D Jelly Rolls 210 373 IPR014710 -
Dod05g1914 601 Pfam Ion channel 72 166 IPR013099 -
Dod05g1914 601 PANTHER K+ TRANSPORTER 1-RELATED 70 480 - -
Dod05g1914 601 Pfam Cyclic nucleotide-binding domain 265 356 IPR000595 -
Dod05g1914 601 PANTHER POTASSIUM CHANNEL AKT1 486 566 IPR045319 GO:0005249|GO:0006813
Dod05g1914 601 ProSiteProfiles KHA domain profile. 501 581 IPR021789 -
Dod05g1914 601 SUPERFAMILY cAMP-binding domain-like 171 363 IPR018490 -
Dod05g1914 601 Gene3D - 63 168 - -
Dod05g1914 601 PANTHER POTASSIUM CHANNEL AKT1 70 480 IPR045319 GO:0005249|GO:0006813
Dod05g1914 601 PANTHER K+ TRANSPORTER 1-RELATED 486 566 - -
Dod05g1914 601 CDD CAP_ED 246 356 IPR000595 -
Dod05g1914 601 SMART ANK_2a 429 458 IPR002110 GO:0005515
Dod05g1914 601 Pfam Ankyrin repeats (3 copies) 401 484 IPR002110 GO:0005515
Dod05g1914 601 Gene3D - 395 506 IPR036770 -
Dod05g1914 601 SUPERFAMILY Ankyrin repeat 401 483 IPR036770 -
Dod05g1914 601 ProSiteProfiles Ankyrin repeat profile. 429 461 IPR002110 GO:0005515
Dod05g1914 601 ProSiteProfiles Ankyrin repeat region circular profile. 429 461 - -
Dod05g1914 601 SMART cnmp_10 246 368 IPR000595 -
Dod05g1914 601 SUPERFAMILY Voltage-gated potassium channels 70 203 - -
Dod05g1914 601 Pfam KHA, dimerisation domain of potassium ion channel 501 563 IPR021789 -
Dod05g1914 601 PANTHER K+ TRANSPORTER 1-RELATED 2 72 - -
Dod05g1914 601 PANTHER POTASSIUM CHANNEL AKT1 2 72 IPR045319 GO:0005249|GO:0006813
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1914 Dod-Chr5 44762982 44766483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1914 501 563 Ion Channels AT2G26650 51.562 2.15e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1914 K21867 - jre:109020689 468.003