Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1911 ATGGACAAGAAAAAGGTGGCGGTTCCTCTTGTGTGCCATGGCCACTCTCGCCCAGTGGTTGATCTCTTCTACAGTCCTGTCACCCCTGATGGGTTCTTCCTCATCAGTGCAAGCAAGGATTCTAGTCCTATGCTCAGGAATGGAGAGACTGGTGATTGGATTGGAACATTTGAAGGGCACAAAGGTGCTGTATGGAGTTGCTGCTTGGATACGAATGCGTTACGTGCTGCAACTGCTTCAGCTGATTTCTCCACGAAAGTTTGGGATGCATTAACAGGAGATGAATTGCACTCTTTTGAGCATAAGCACATCGTTCGTGCTTGTGCTTTTTCTGAGGATACACACCTTTTGCTCACTGGGGGAGTAGAGAAAATTCTCCGAATTTATGATCTGAATCGGCCTGATGCACAACCCAGGGAAGTGGATAAATCTCCTGGGTCAGTCAGAACTGTTGCTTGGCTTCATAGTGACCAGACAATATTGAGCTCTTGTACTGATATGGGAGGGGTCAGGTTGTGGGATATAAGAAGTGGTAAAATAGTTCAGACACTCGAAACCAAGTCATCAGTTACAAGTGCTGAAGTGAGTCAGGATGGCCGTTATATTACAACTGCTGATGGTTCTACTGTGAAGTTTTGGGATGCAAACTACTATGGATTGGTAAAGAGCTATGACATGCCTTGTACTGTGGAATCAGCTTCCTTGGAGCCAAAGTATGGGAACAAGTTCATTGCTGGGGGAGAAGATATGTGGGTTCATGTGTTTGATTTCCATACAGGCAATGAGATTGCATGCAACAAGGGCCACCATGGTCCTGTCCACTGTGTCCGTTTCTCTCCTGGAGGAGAATCATATGCTTCAGGATCTGAGGATGGAACCATCAGAATATGGCAGACAGGTCCATTGACTCATGATGAATCGGAGGCGTTACCGGCAAATGGATCAATTGAAAAGGTGAAGGTAGCTGCAGATGAGGTTTCACGCAAGATTGAGGGTTTTCATATTGCAGATGAGGGGAAATCCAAAGAAAAGGAAGAGGCAGGGGAGGAATGA 1053 0.4615 MDKKKVAVPLVCHGHSRPVVDLFYSPVTPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAATASADFSTKVWDALTGDELHSFEHKHIVRACAFSEDTHLLLTGGVEKILRIYDLNRPDAQPREVDKSPGSVRTVAWLHSDQTILSSCTDMGGVRLWDIRSGKIVQTLETKSSVTSAEVSQDGRYITTADGSTVKFWDANYYGLVKSYDMPCTVESASLEPKYGNKFIAGGEDMWVHVFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPLTHDESEALPANGSIEKVKVAADEVSRKIEGFHIADEGKSKEKEEAGEE* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1911 350 PANTHER OS02G0205400 PROTEIN 1 345 - -
Dod05g1911 350 SMART WD40_4 92 130 IPR001680 GO:0005515
Dod05g1911 350 SMART WD40_4 217 256 IPR001680 GO:0005515
Dod05g1911 350 SMART WD40_4 177 214 IPR001680 GO:0005515
Dod05g1911 350 SMART WD40_4 259 298 IPR001680 GO:0005515
Dod05g1911 350 SMART WD40_4 5 47 IPR001680 GO:0005515
Dod05g1911 350 SMART WD40_4 134 174 IPR001680 GO:0005515
Dod05g1911 350 SMART WD40_4 50 89 IPR001680 GO:0005515
Dod05g1911 350 Pfam WD domain, G-beta repeat 54 89 IPR001680 GO:0005515
Dod05g1911 350 Pfam WD domain, G-beta repeat 179 214 IPR001680 GO:0005515
Dod05g1911 350 Pfam WD domain, G-beta repeat 265 297 IPR001680 GO:0005515
Dod05g1911 350 Pfam WD domain, G-beta repeat 94 130 IPR001680 GO:0005515
Dod05g1911 350 Gene3D - 9 323 IPR015943 GO:0005515
Dod05g1911 350 ProSiteProfiles Trp-Asp (WD) repeats profile. 98 139 IPR001680 GO:0005515
Dod05g1911 350 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 266 298 - -
Dod05g1911 350 SUPERFAMILY WD40 repeat-like 4 301 IPR036322 GO:0005515
Dod05g1911 350 ProSiteProfiles Trp-Asp (WD) repeats profile. 57 98 IPR001680 GO:0005515
Dod05g1911 350 ProSiteProfiles Trp-Asp (WD) repeats profile. 266 298 IPR001680 GO:0005515
Dod05g1911 350 CDD WD40 14 298 - -
Dod05g1911 350 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I 1 345 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1911 9 296 Eukaryotic Initiation Factors Gene Family AT2G46290 29.688 1.23e-39 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1911 K13137 - gmx:100782712 670.233