Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1903 ATGATTCTGCAGTCCTCACGCGTGATCATGAACCCAAACATTAACATCACCAACGAGGTTGATGATGGCCTCCTCCACAACATCGTGCCTAATTCTTCACTACACCTTTCCCAGCTCGCTTCCGATAATACACACTACAATCACAATAACAATTACAATTACAACCCTTACGATTTCGGTTCCTCCTGGACACAGGCTCTCCTAAACGACACCGTTTCTTCTCCCTCTCAACTCACCGACCTTCACCTACCTCAGCTACCACTACCACCGCCGCCGCTTGGTCATCATCAAACGGCGGCGGTGACCGAGCCACAACAAGAAGAAGAAGACTCCGCGATAAAGCTGGTCCACATGCTCATCTCATGCGCCGAATCCCTCCAAAGAGGCCACGTGGCACACGCCGCGTCCCTCATCGACGCCATGCAATCTCTCTTGCGACACGTCAGCACCGCCTCCGCCATTGGAAAAGTCGCCGCTCACTTCATCCACGCTCTCACGCGCCGCGTCTACGCTCCGCCGACGACGGACCTCAACGGCGCCGCCGACGACGGGGGCGTTCTCTACCACCACTTCTACGAGGCGTGTCCTTACCTCAAGTTCGCTCACTTCACCGCCAACCAAGCCATCCTCGAGGCCTTCAGCGGCCACAACTGCGTCCACGTCATCGACTTCCACCTCGCGCACGGCCTCCAATGGCCGCCGCTCATCCAGGCCCTCGCCTTACGCCCCGGCGGTCCTCCCTCCCTCCGGATTACCGGCATTGGCCCTCCCTCGCCGGACCGCCGTGACGCCCTCCGCGAAACCGGACTCCGGCTGGCGGAGCTCGCACGCTCCGTCAATGTCCGGTTCGCGTTCCGCGGAGTTGCAGCGTCGCGGCTCGAGGACGTGGAGCCGTGGATGCTGCAGGTTCGGCCGGCGGAAGCCGTGGCTGTGAACTCCGTCATGCAGCTCCACCGTCTCCTCGGATCAGACCCGATCCACGGCGATTCGGGGATTGAATCGGTTCTCGGTTGGATCCGAATGCTGAAGCCTAAGATTGTGACGGTGGTGGAGCAAGAAGCGAATCACAACCAAACCGGGTTCTTGGAGCGGTTCACGGAAGCGCTGCATTACTACTCGGCCGTTTTCGACTCGCTGGAGGCTTGTCCGGTCGAACCGGATAAGGTTTTGGCCGAAATGTATCTCGAGAGAGAGATTTGCAACGTGGTGTGTTGTGAGGGCCCGGCCCGGGTTGAGAGGCATGAGCCGGTGGCCCAGTGGAAGGCCCGGCTTGAGAAAGCGGGGTTTGAGTGTGTGGGCCTGGGCTCAAATGCGTTGAGGCAAGCGAGCATGCTGTTGAGTCTTTTCTCGGCTGAGGGTTACTGCGTGGAAGAGAAGGAAGGGTGTTTGACTTTGGGTTGGCATGGCAGGCCCCTCATTGCGGCTTCTGCTTGGCAAACCTTACCCCTCCTTCCGCACACTGAGCCACACAGGCTTGCTTAG 1482 0.5918 MILQSSRVIMNPNINITNEVDDGLLHNIVPNSSLHLSQLASDNTHYNHNNNYNYNPYDFGSSWTQALLNDTVSSPSQLTDLHLPQLPLPPPPLGHHQTAAVTEPQQEEEDSAIKLVHMLISCAESLQRGHVAHAASLIDAMQSLLRHVSTASAIGKVAAHFIHALTRRVYAPPTTDLNGAADDGGVLYHHFYEACPYLKFAHFTANQAILEAFSGHNCVHVIDFHLAHGLQWPPLIQALALRPGGPPSLRITGIGPPSPDRRDALRETGLRLAELARSVNVRFAFRGVAASRLEDVEPWMLQVRPAEAVAVNSVMQLHRLLGSDPIHGDSGIESVLGWIRMLKPKIVTVVEQEANHNQTGFLERFTEALHYYSAVFDSLEACPVEPDKVLAEMYLEREICNVVCCEGPARVERHEPVAQWKARLEKAGFECVGLGSNALRQASMLLSLFSAEGYCVEEKEGCLTLGWHGRPLIAASAWQTLPLLPHTEPHRLA* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1903 493 PANTHER OS05G0574900 PROTEIN 44 483 - -
Dod05g1903 493 ProSiteProfiles GRAS family profile. 106 479 IPR005202 -
Dod05g1903 493 Pfam GRAS domain family 115 479 IPR005202 -
Dod05g1903 493 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 44 483 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1903 Dod-Chr5 44663856 44666068 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1903 107 479 GRAS Transcription Factor Family AT1G14920 54.233 2.19e-142 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dod05g1903 GRAS 1.4e-124 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1903 K14494 - fve:101314119 585.489