Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1896 ATGGCGCTCTTTCTGCACAGCGCTCTTGTTGTGTTCCTCTTGTTGACCGCGAGTTGCCGGGTCAACTCGGAGCCGGCCCAGGACAAGCAAGCACTCCTTGCTTTCATATCCAAAATCCGACACGCGAACCGAGTCCAATGGAACGCTTCCGACTCGGCCTGCAACTGGGTCGGGGTAGAATGCGACTCGTCTCGCTCCTTCGTCTACTCCCTACGCCTCCCGGGAGTGGGCCTAGTGGGCCGGGTCCCGCCAGACACAATCGGGCGGCTGGCCCAGCTCCGCATCCTCAGCCTTCGCGCCAACGGACTCACCGGCGAGATCCCCTCCGATTTCTCCAACCTCACACTCCTCCGCAGCCTCTACCTCCAAAACAACCGGCTCTCCGGCGAGTTCCCAAACTCCTTCACGCGCCTCACTCGCCTCACTCGCTTGGATCTCTCCTCAAACAACTTCTCCGGCCCCATCCCTTACTCCCTCAACAACCTCACCCACCTCACCGGTCTCTTCCTCGAGAATAACCGTTTCTCCGGCTCCCTCCCAAGTATAACCGTCAAGTTAGTTGGCTTCAACGTCTCCAATAACCGCCTCAACGGCTCGATCCCCGAAACGCTGTCCAGATTCCCCGAATCCTCATTCACCGGAAACCTAGATCTCTGCGGCGGGCCGTTACAGCGGTGTAATCCTTTCTTCCCTGCGCCGGCGCCGTCTCCGGGGGTACCTCCGCCAATGAACCCGGCTCATAAGAAGTCCAAGAAGCTCTCCACCGGCGCCATTGTCGCAATTGTTGTTGGCTCTGTGCTGGCTTTGGCGCTGCTGCTTTTGCTTCTGTTGCTGTGTCTTCGGAAGCGGCAGCGGCGGCAGCCGCCTAAGCCCCCGAAGCCTGTGGCGGCGGCGGCGCGGGGAGTGACGGCGGAGGTGGGGACGTCGTCGTCGAAGGAGGACATAACGGGAGGGTCGGCGGAGGCCGAGAGGAACAAGCTGGTGTTCTTCGAAGGAGGGATATACAGCTTCGATTTGGAGGATCTGCTGAGGGCTTCGGCGGAGGTTCTCGGGAAGGGAAGCGTAGGGACTTCGTACAAGGCGGTGCTTGAGGAAGGGACCACAGTGGTTGTGAAGAGGTTGAAGGACGTTGTGGTTACGAAGAGAGAGTTCGAGATGCAAATGGAGGTCCTTGGGAAGATCAAGCACGATAATGTGGTTCCTCTCAGAGCGTTTTACTTCTCCAAGGATGAGAAGTTGCTCGTTTACGATTACTTGTCCGCTGGAAGCTTGTCTGCTCTCCTTCACGGGAGCAGAGGGTCAGGGAGAACGCCGCTAGATTGGGACAACCGGATGAAAATCGCGCTAGGAGCAGCAAAAGGCCTAGCATGCCTCCACGTGTCAGGAAAAGTGGTCCACGGCAACATCAAATCTTCCAACATCCTCCTCCGGGGACCGGACCACGAAGCCTGCGTTTCGGACTTTGGCCTTAACCCCTTGTTCGGAAACGGAGCCCCATCCAACCGGGTCGCGGGTTATCGGGCACCCGAAGTCATAGAAACCCGCAAGGTCAACTTCAAATCTGACGTGTACAGCTTCGGTGTGTTGCTCTTGGAGCTATTAACGGGGAAAGCACCAAACCAAGCCTCTCTTGGCGAGGAAGGCATCGATCTCCCGAGGTGGGTCCAATCGGTGGTACGAGAGGAGTGGACCGCTGAGGTGTTCGACGCCGAGCTCATGAGGTTCCACAACATCGAAGAAGAGATGGTCCAGCTCTTGCAGATCGCAATGGCTTGTGTCTCGGTGGTGCCCGATCAGAGACCCGACATGCAAGAAGTGGTTCGCATGATCGAGGACATGAACCGTGGCGAGACCGACGAGGGCTTGAGACAGTCGTCCGATGATCCTTCCAAAGGATCCGAGGGTCACACTCCACCCCCGGAGTCAAGGACTCCACCTAGATCCGTCACACCGTAA 1956 0.5803 MALFLHSALVVFLLLTASCRVNSEPAQDKQALLAFISKIRHANRVQWNASDSACNWVGVECDSSRSFVYSLRLPGVGLVGRVPPDTIGRLAQLRILSLRANGLTGEIPSDFSNLTLLRSLYLQNNRLSGEFPNSFTRLTRLTRLDLSSNNFSGPIPYSLNNLTHLTGLFLENNRFSGSLPSITVKLVGFNVSNNRLNGSIPETLSRFPESSFTGNLDLCGGPLQRCNPFFPAPAPSPGVPPPMNPAHKKSKKLSTGAIVAIVVGSVLALALLLLLLLLCLRKRQRRQPPKPPKPVAAAARGVTAEVGTSSSKEDITGGSAEAERNKLVFFEGGIYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVVVTKREFEMQMEVLGKIKHDNVVPLRAFYFSKDEKLLVYDYLSAGSLSALLHGSRGSGRTPLDWDNRMKIALGAAKGLACLHVSGKVVHGNIKSSNILLRGPDHEACVSDFGLNPLFGNGAPSNRVAGYRAPEVIETRKVNFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDAELMRFHNIEEEMVQLLQIAMACVSVVPDQRPDMQEVVRMIEDMNRGETDEGLRQSSDDPSKGSEGHTPPPESRTPPRSVTP* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1896 651 PANTHER OS05G0588300 PROTEIN 10 638 - -
Dod05g1896 651 MobiDBLite consensus disorder prediction 611 651 - -
Dod05g1896 651 SUPERFAMILY L domain-like 48 212 - -
Dod05g1896 651 Gene3D Ribonuclease Inhibitor 25 183 IPR032675 -
Dod05g1896 651 Pfam Leucine rich repeat N-terminal domain 26 62 IPR013210 -
Dod05g1896 651 Gene3D Phosphorylase Kinase; domain 1 310 418 - -
Dod05g1896 651 SUPERFAMILY Protein kinase-like (PK-like) 348 610 IPR011009 -
Dod05g1896 651 Gene3D Ribonuclease Inhibitor 184 229 IPR032675 -
Dod05g1896 651 MobiDBLite consensus disorder prediction 611 630 - -
Dod05g1896 651 Pfam Protein kinase domain 347 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g1896 651 ProSiteProfiles Protein kinase domain profile. 344 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g1896 651 Pfam Leucine rich repeat 117 175 IPR001611 GO:0005515
Dod05g1896 651 PANTHER RECEPTOR-LIKE KINASE 10 638 - -
Dod05g1896 651 MobiDBLite consensus disorder prediction 285 317 - -
Dod05g1896 651 CDD STKc_IRAK 350 613 - -
Dod05g1896 651 Gene3D Transferase(Phosphotransferase) domain 1 419 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1896 Dod-Chr5 44570948 44575785 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1896 4 631 Receptor kinase-like Gene Family AT5G58300 53.906 0.0 633
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dod05g1896 Pkinase 2.7e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1896 - - gmx:100806857 967.607