Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1878 ATGGCTGCAAGATTGAGTGATGTGGACATGGTTCCTCACCATGCTGGCAGTGTTGCACTTTTCTTTGCCCATACTGCTGGATGTGTTTATTACCGAATTGCAATGAGTTACAGTAATCCAGATAGGACATGGTTTGACGGATCACCAAATGATATTCTTAGTCAAAGTTTATGGGCAAGATATGCCACATCTGTTTATTGGTTAATGACAACATTGTCAACCGTTGGATATGGTGATTTCCATCCAATGAACCCCACAGAAATGATCATTGGCGTCTTATATATGGTTTTCAATCTAATGTTAGGATCATATTTACTAGGGAATATGAGCAATTCGATAGTCTATGCAGAAAGCCGCACAAGCAAATATAGAAACACCACAAAAATATTTTCGAATTTTGCTCAAAGGAATGAACTACTTGCCATTTTGCAAGACCACGTGAATGAATATCTGTATTTCAAGTTTCGAACAAACACAGAGTCATTGGAAGAGCAAGAGGCTCTTGATTATTTGCCCCAAGCCCTGAGATCGAGCATTTCTCAAAATCTTTGTATTTTAGATGTGAATTCTAATACCTGGATTGATCGGCAGGACTTGCGAGCTCTTGATAACAATGAAAATAGAAATCCACTTCCTGGACTATCTTCGTCCTAG 654 0.3884 MAARLSDVDMVPHHAGSVALFFAHTAGCVYYRIAMSYSNPDRTWFDGSPNDILSQSLWARYATSVYWLMTTLSTVGYGDFHPMNPTEMIIGVLYMVFNLMLGSYLLGNMSNSIVYAESRTSKYRNTTKIFSNFAQRNELLAILQDHVNEYLYFKFRTNTESLEEQEALDYLPQALRSSISQNLCILDVNSNTWIDRQDLRALDNNENRNPLPGLSSS* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1878 217 SUPERFAMILY Voltage-gated potassium channels 18 150 - -
Dod05g1878 217 Pfam Ion transport protein 20 120 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Dod05g1878 217 Gene3D - 9 114 - -
Dod05g1878 217 PANTHER POTASSIUM CHANNEL AKT1 17 183 IPR045319 GO:0005249|GO:0006813
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1878 Dod-Chr5 44321366 44323585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1878 17 183 Ion Channels AT2G26650 52.096 5.66e-55 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1878 K21867 - fve:101311506 191.815