Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1858 ATGGCCACTCTCTTGCTCAAAGGCTCATACTCAATTATCCTTTCATTGATTTTTGTTGTTTGTGGATCAAATGTATGGCTTGTGAATTGTACTGAGTTTGAAGTTGGAGGTCATGATGGCTGGGTGGTCCCCAAGTCAAGGGACAATGATCAGATGTACAATCAGTGGGCTTCTCAAAAGAGGTTCAAAGTTGGTGACACTCTTCGTTTCAAGTACGAGAAAGACTCGGTTATGGTGGTGACTGAAGAAGAATACGAAAGCTGCAGATCCTCACGTCCACTCTTGTTCTCAAACAACGGTGACACGGTCTTCAAATTTGACCGGCCGGGCATGTTCTACTTCATCAGCGGGGTTAGTGGCCACTGTGCCAGAGGCCAGAAGATGATCATTAAGGTCTTGGACGTACACGTGCCCCCAGCACCCGCACCACAATCCGAGAATGTCAATGCAACTCAACCCAAGTCTAAAAGTGGAGCTGCTCATGAAATGAGTCCTAGGAGCATAACAACAACCACCACCTCCGCACTGCTTTTTGTTGTGTCATTCTTTGGCTTGCTTTATGCTTGA 567 0.4656 MATLLLKGSYSIILSLIFVVCGSNVWLVNCTEFEVGGHDGWVVPKSRDNDQMYNQWASQKRFKVGDTLRFKYEKDSVMVVTEEEYESCRSSRPLLFSNNGDTVFKFDRPGMFYFISGVSGHCARGQKMIIKVLDVHVPPAPAPQSENVNATQPKSKSGAAHEMSPRSITTTTTSALLFVVSFFGLLYA* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1858 188 MobiDBLite consensus disorder prediction 141 166 - -
Dod05g1858 188 MobiDBLite consensus disorder prediction 144 166 - -
Dod05g1858 188 PANTHER BLUE COPPER PROTEIN 17 181 IPR039391 GO:0009055
Dod05g1858 188 CDD OsENODL1_like 31 133 IPR041846 -
Dod05g1858 188 PANTHER EARLY NODULIN-LIKE PROTEIN 5 17 181 - -
Dod05g1858 188 Gene3D - 30 136 IPR008972 -
Dod05g1858 188 Pfam Plastocyanin-like domain 49 126 IPR003245 GO:0009055
Dod05g1858 188 ProSiteProfiles Phytocyanin domain profile. 31 134 IPR003245 GO:0009055
Dod05g1858 188 SUPERFAMILY Cupredoxins 30 133 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1858 Dod-Chr5 44115470 44116903 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1858 8 135 Phytocyanin Superfamily AT1G48940 62.500 1.19e-58 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1858 - - gmx:102667643 243.047