Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1851 ATGACTGGGGGAAGGAGGAGGAAGCACCACTTCAGCAGAATCCATGCCTTCACACGTGGGAAGTCTTCAATGAAAGATGAGCATTCACTCATAGGAGGCCCTGGCTTCTCAAGGAAAGTGTATTGCAATGACCCTGAACGTGCTGAGGCCAGTCTTGTGAATTATGGTGACAATTATGTCAGAACAACTAAGTACACTTTGGCCACGTTCCTCCCTAAGTCCTTGTTTGAGCAGTTCAGGAGGGTTGCAAATTTCTACTTCCTTGTTGTTGCAATTTTGTCTTTCTTCCCTGTTGCTCCTTACTCAGCCATCAGCAATGTTGTTCCCTTGCTGATTGTGGTTGCTGCTACAATGGCCAAAGAGTTCGTTGAGGATTGGAGGAGGAAACAGCAGGATATTGAGATGAATAACAGAAAGGTTAAAGTACATCGCGGAGGTGGTGTTTTTGACCAATCTAAATGGAGGGATTTGAGAGTTGGAGATATAGTGAAAGTGGAAAAAGACGAATTTTTCCCTGCTGATCTCATCTTACTCGCATCGAGCTATGACGACGCAATTTGCTATGTTGAGACCATGAATCTTGATGGAGAAACAAATCTTAAACTGAAACAAGCGTTGGAGGGTACTTCAAAGTTGCAAGAAGACTCAAGCTTTCAAAATTTCAAGGCCGTCATCAGATGTGAAGATCCAAATGCAAATTTGTACACGTTTGTAGGCAGTTTGGATGACGAGGATCAACGGTATCCTCTTGCACCTCAGCAGCTACTGCTTAGGGACTCGAAGCTGAGGAATACAGATTTTATCTATGGTGTGGTAATCTTTACTGGTCACGATACAAAGGTTATGCAGAATTCAACAGAACCACCATCCAAGAGAAGCAAAATTGAGAGAAGGATGGATAAGATTATCTACTTCCTGTTCTTCGTCTTAATTTTGATTTCTTTTATTGGGTCCATATTCTTTGGGATTAAAACAAACGACGACATCGAAGATGGAAGAATGAAGAGATGGTACCTTAGACCAGATGATACCGAAATTTACTATGACCCAAATAAACCAGCAGTTGCAGCACTTCTGCATTTCTTGACGGCACTTATGTTGTATGGTTACTTGATTCCGATTTCCTTGTATGTCTCAATCGAAATTGTGAAAGTTCTCCAGAGCATTTTCATTAACCAGGATGTGCACATGTATTATGAGGAAACTGACAAGCCAGCACATGCTCGTACATCAAATTTGAATGAAGAACTTGGTCAAGTTGATACCATACTTTCGGATAAAACAGGAACTTTGACTTGCAATTCTATGGAATTTATCAAGTGTTCTATTGCTGGGGTTGCTTATGGACGAGGTGTTACAGAAGTTGAGAGAGCACTATCTCAGAGAAGAGAATCACCATTAGGACAAAAGTCAAAAGGAGGAAACAACAGTGTTGCAAAGTCATCCATTAAAGGGTTTAACTTTACAGATGAAAGGATCATGAATGGAAATTGGGTCAAAGAACCCAATGCCAATGTAATCCGGAACTTCTTGAGGTTGTTGGCTGTATGCCATACTGCGATACCTGAGGTTGATGAAGACACTGGTAAGGTTTCATATGAAGCTGAATCACCAGATGAGGCAGCTTTTGTGATTGCAGCCAGAGAACTTGGGTTTGAGTTCTATGAAAGGACGCACACAGCCATTTCACTGCGTGAATTTGATCCCACATCAGGCAGAAAAGTTGAAAGGTCCTACAAACTTCTAAACATATTAGAGTTTAGTAGTGCAAGAAAGCGGATGTCTGTAATTGTAAGAGATGAGGAGGGGAGACTGCTAATACTCAGCAAAGGCGCTGACAGTGTCATGTTTGAACGACTTGCTAACAATGGAAGGGAGTTTGAAGAGTCTACTAAGCAACACATTAGTGAATATGCAGATTCTGGTTTGAGAACCTTAATACTTGCATATCGTGAACTTGACGAGGAAGAATATAATCAATTTAACAAAGAATTCACAGAGGCCAAGAACTTAGTGAGTGCAGATCAGGAGCAGAATGTAGAGGAAATAGTACAAAATATAGAGAAGGATTTAATTCTTCTTGGTGCTACTGCTGTTGAAGACAAACTTCAAGATGGGGTTCCTGAGTGCATTGACAGGCTGGCACAGGCTGGGATTAAGCTATGGGTTTTGACTGGTGATAAAATGGAGACAGCAATCAATATTGGTTTTGCTTGTAGTTTACTCAGACAAGGGATGACACAAATAATAATTAGCTCAGAAAACCCAGAAACTATAGCACTAGATAAAATGGAGGACAAATCTGCTGCTGAAAAGGCAATGAAGGAAAGTGTTCTTCGTCAAATAAAGGAAGGAAAGGCATTGCTTTCTACATCAAATGAAAACTCTCAGGCGCTAGCTTTGATTATTGATGGAAAGTCTCTTACTTATGCATTAGAAGATGATGTCAAGGACTTGTTTCTTGAACTTGCCGTTGGCTGTGCATCTGTTATATGCTGTCGTTCATCTCCCAAGCAGAAAGCACTTGTTACAAGACTGGTCAAGATTAAAACTGGAAGTACAACACTAGCAATTGGAGATGGAGCAAATGATGTCGGGATGCTTCAAGAAGCAGACATTGGGATTGGTATTAGTGGTGTCGAAGGAATGCAGGCAGTTATGTCAAGTGATATTGCAATTGCCCAATTTCGGTTTCTGGAGCGCTTACTTCTTGTGCATGGACATTGGTGTTATAGAAGGATCTCATCCATGGTAACAATCTTTTCTTGTTTTCACATATATAATGCTAGGAGATTCTTTATTTGA 2805 0.4082 MTGGRRRKHHFSRIHAFTRGKSSMKDEHSLIGGPGFSRKVYCNDPERAEASLVNYGDNYVRTTKYTLATFLPKSLFEQFRRVANFYFLVVAILSFFPVAPYSAISNVVPLLIVVAATMAKEFVEDWRRKQQDIEMNNRKVKVHRGGGVFDQSKWRDLRVGDIVKVEKDEFFPADLILLASSYDDAICYVETMNLDGETNLKLKQALEGTSKLQEDSSFQNFKAVIRCEDPNANLYTFVGSLDDEDQRYPLAPQQLLLRDSKLRNTDFIYGVVIFTGHDTKVMQNSTEPPSKRSKIERRMDKIIYFLFFVLILISFIGSIFFGIKTNDDIEDGRMKRWYLRPDDTEIYYDPNKPAVAALLHFLTALMLYGYLIPISLYVSIEIVKVLQSIFINQDVHMYYEETDKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGRGVTEVERALSQRRESPLGQKSKGGNNSVAKSSIKGFNFTDERIMNGNWVKEPNANVIRNFLRLLAVCHTAIPEVDEDTGKVSYEAESPDEAAFVIAARELGFEFYERTHTAISLREFDPTSGRKVERSYKLLNILEFSSARKRMSVIVRDEEGRLLILSKGADSVMFERLANNGREFEESTKQHISEYADSGLRTLILAYRELDEEEYNQFNKEFTEAKNLVSADQEQNVEEIVQNIEKDLILLGATAVEDKLQDGVPECIDRLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMTQIIISSENPETIALDKMEDKSAAEKAMKESVLRQIKEGKALLSTSNENSQALALIIDGKSLTYALEDDVKDLFLELAVGCASVICCRSSPKQKALVTRLVKIKTGSTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMVTIFSCFHIYNARRFFI* 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1851 934 MobiDBLite consensus disorder prediction 459 478 - -
Dod05g1851 934 Pfam E1-E2 ATPase 135 329 - -
Dod05g1851 934 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Dod05g1851 934 PRINTS P-type cation-transporting ATPase superfamily signature 858 877 - -
Dod05g1851 934 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 922 - -
Dod05g1851 934 SFLD Haloacid Dehalogenase 406 909 - -
Dod05g1851 934 Pfam Phospholipid-translocating P-type ATPase C-terminal 886 921 IPR032630 -
Dod05g1851 934 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 493 695 IPR023299 GO:0000166
Dod05g1851 934 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 922 - -
Dod05g1851 934 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 55 921 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Dod05g1851 934 SUPERFAMILY Calcium ATPase, transmembrane domain M 45 928 IPR023298 -
Dod05g1851 934 SFLD p-type atpase 406 909 IPR044492 -
Dod05g1851 934 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 825 921 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod05g1851 934 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 107 207 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod05g1851 934 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Dod05g1851 934 Pfam Cation transport ATPase (P-type) 517 619 - -
Dod05g1851 934 Gene3D - 114 286 - -
Dod05g1851 934 Gene3D - 690 898 IPR023214 -
Dod05g1851 934 SUPERFAMILY Calcium ATPase, transduction domain A 137 284 IPR008250 -
Dod05g1851 934 Gene3D - 534 671 IPR023299 GO:0000166
Dod05g1851 934 MobiDBLite consensus disorder prediction 464 478 - -
Dod05g1851 934 Pfam Phospholipid-translocating ATPase N-terminal 40 105 IPR032631 -
Dod05g1851 934 CDD P-type_ATPase_APLT_Dnf-like 57 921 - -
Dod05g1851 934 SUPERFAMILY HAD-like 419 913 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1851 Dod-Chr5 44034964 44041572 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1851 1 932 Primary Pumps ATPases AT1G68710 70.445 0.0 1392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1851 K01530 K14802 gmx:100799312 1593.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1851 05 44034964 44041572 Dod09g0533 09 8356072 8363475 ECH
Dod05g1851 05 44034964 44041572 Dod05g1851 05 44034964 44041572 ECH