Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1834 ATGGGGTGCTCATTTTCTGGTTTAAACGCATTGTACGATTCCGTTAACGGAGGAGGAGACGTGTGGATCAACGAGAACCGCTTCCGCATCGTGAGGAAGCTCGGCGAAGGTGGCTTCGCCTACGTGTTCCTCGTCAAGGAGCTTCCCGCTGATTCTACTTCCGGTGGTGGTGGCCTTGCCGCCAAGCTTAAACACTCCTCTCATTTCTCTGAGGACGGAACTTATGCTATGAAAAAGGTCCTCATTCAGAACAATGAACAGCTGGAGTTGGTCAGGGAGGAGATCCGTGTTTCATCACTGTTCAATCACCCAAATCTGCTTCCGCTCCTTGATCATGCGATCATTTCTGTCAAGCCTACCCCAGAAAAATCTTGGAACCACGAGGCATACTTGTTATTTCCAGTTCATTTGGATGGAACATTGCTAGACAATGCCAAGACAATGAAAGCCAAGAAGGAGTTCTATTCTACCTCAGATGTTCTTCAAATCTTTCGGCAGCTTTGTGCAGGACTCAAGCATATGCACAGTTTGGATCCTCCATATGCTCATAATGATGTGAAACCTGGTAATGTTATGATAACACATAGAAAAGGACAACCACCTCTTGCCATATTGATGGATTTCGGCAGCGCTCGTCCTGCCAGGAGGCAAATTAGCTCAAGATCAGAGGCACTCCAGTTGCAGGAATGGGCATCTGAACATTGCTCAGCCCCTTTCCGAGCTCCTGAGCTATGGGATTGCCCAAGCCAAGCTGATATAGATGAGAGGACTGACGTTTGGTCACTAGGATGCACATTATATGCGATAATGTATGGGGTATCTCCGTTTGAGTATGCACTTGGAGAGTCTGGTGGAAGCCTGCAATTAGCTGTTGTAAATGCTCAGATCAAATGGCCAACTGGACCTAAGCCTTCATATCCAGATGCCCTTCATCAGTTTATAACATGGATGCTTCAGCCTCAGCCTACTGTGCGGCCCCGGATAGACGATATCATTATCCACGTTGATAAGTTAATTGCAAAGTTCTCTCAGTGA 1035 0.4705 MGCSFSGLNALYDSVNGGGDVWINENRFRIVRKLGEGGFAYVFLVKELPADSTSGGGGLAAKLKHSSHFSEDGTYAMKKVLIQNNEQLELVREEIRVSSLFNHPNLLPLLDHAIISVKPTPEKSWNHEAYLLFPVHLDGTLLDNAKTMKAKKEFYSTSDVLQIFRQLCAGLKHMHSLDPPYAHNDVKPGNVMITHRKGQPPLAILMDFGSARPARRQISSRSEALQLQEWASEHCSAPFRAPELWDCPSQADIDERTDVWSLGCTLYAIMYGVSPFEYALGESGGSLQLAVVNAQIKWPTGPKPSYPDALHQFITWMLQPQPTVRPRIDDIIIHVDKLIAKFSQ* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1834 344 Pfam Protein kinase domain 57 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g1834 344 PANTHER - 1 343 - -
Dod05g1834 344 CDD STKc_16 27 340 - -
Dod05g1834 344 ProSiteProfiles Protein kinase domain profile. 28 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g1834 344 SMART serkin_6 28 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g1834 344 ProSitePatterns Serine/Threonine protein kinases active-site signature. 181 193 IPR008271 GO:0004672|GO:0006468
Dod05g1834 344 SUPERFAMILY Protein kinase-like (PK-like) 20 334 IPR011009 -
Dod05g1834 344 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 1 343 - -
Dod05g1834 344 ProSitePatterns Protein kinases ATP-binding region signature. 34 62 IPR017441 GO:0005524
Dod05g1834 344 Gene3D Transferase(Phosphotransferase) domain 1 17 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1834 Dod-Chr5 43902690 43907068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1834 33 334 EF-hand Containing Proteins AT4G04710 25.407 1.95e-15 75.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Dod05g1834 Pkinase 3.6e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1834 K08856 - gmx:100803659 647.121