Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1811 ATGGAGTCTCTATGGTTACTAGCCACTGGATCTGTTGTCCACCGTGGTGGCGGCTTCTTGGCAACATTGCTCCTGTTACTGCTCTCTTGCACCGCATTCCCTTCTACAGAAGCCTATGATGCACTTGATCCAACTGGCAATATAACAATCAAATGGGATATCATAAGCTGGACTGGTGACGGCTATGTTGCTGTTGTTACAATGTACAACTTTCAACAGTATCGCCATATTCAGGCTCCTGGATGGACATTAGGGTGGACATGGGCTAAAAAGGAAGTAATTTGGAGCATGATGGGAGGCCAAACTACAGAGCAAGGAGACTGTTCGAAGTTCAAAGGGAGCATTCCACATTGCTGTAAGAAGAACCCAACAGTAGTGGATTTACTTCCAGGGACTCCTTACAACCAGCAGATTGCAAATTGTTGCAAAGGGGGGGTCTTAAACTCATGGGCTCAGGATCCTGAAACTGCATTAAGTTCATTTCAAATTAGTGTCGGCATGGCCGGAACAACTAACAAAACGGTTAAATTGCCAAGAAATTTTACCCTGAAAGCACCAGGTCCTGGTTATACTTGTGGCCCTGCAAAGATTGTGAGACCAACAAAATTTATTACTAATGACAAGAGGAGAACCACTCAGGCCTTGATGACCTGGAATGTTACCTGCACGTATTCTCAATTCCTGGCTCAAAAGACACCAACATGTTGTGTTTCTCTTTCATCCTTCTATAATGATACAATAGTAAACTGCCCAACCTGCACATGTGGCTGTCGAAACAAAACAGATCCTGGCAGCTGTGTCGATCGAGACTCTCCACATTTAGCTTCAGTTGTGTCACCACCAGGCAAAGCTTTAAATACACCTCTAGTCCAGTGCACAAGCCATATGTGTCCTATTCGGGTGCATTGGCATGTTAAGCTCCAATATAAGGAGTACTGGAGGGTAAAGATCACAGTCACAAATTTCAATTACAGAATGAACTATTCACAATGGAACCTTGTTGTGCAGCACCCCAATTTCGACAATCTAACCCAGGCTTTCAGCTTCAAGTATAAGCCACTAACACCTTATGAGGGCTTAAATGATACTGGCATGCTGTGGGGAGTCAAGTTCTATAATGATTTACTTACTTCAGCTGGACCCCTTGGGAATGTGCAGTCAGAGCTCTTATTTAGAAAGGACAAAGCAACCTTCACATTTGATAAGGGATGGGCTTTCCCGCGAAGAATTTATTTCAATGGAGATAACTGTGTAATGCCACCTCCAGATGCCTATCCATGGCTGCCCAATGCAAGTTCAAAACTAGCTTTATCGTCAATAAGTGCTGTCATAGGCGTTCTAGCTTCTTTGGTAGTACTATTGACTTGA 1368 0.4379 MESLWLLATGSVVHRGGGFLATLLLLLLSCTAFPSTEAYDALDPTGNITIKWDIISWTGDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGGQTTEQGDCSKFKGSIPHCCKKNPTVVDLLPGTPYNQQIANCCKGGVLNSWAQDPETALSSFQISVGMAGTTNKTVKLPRNFTLKAPGPGYTCGPAKIVRPTKFITNDKRRTTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTIVNCPTCTCGCRNKTDPGSCVDRDSPHLASVVSPPGKALNTPLVQCTSHMCPIRVHWHVKLQYKEYWRVKITVTNFNYRMNYSQWNLVVQHPNFDNLTQAFSFKYKPLTPYEGLNDTGMLWGVKFYNDLLTSAGPLGNVQSELLFRKDKATFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNASSKLALSSISAVIGVLASLVVLLT* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1811 455 PANTHER PROTEIN COBRA 15 454 IPR006918 GO:0010215|GO:0031225
Dod05g1811 455 PANTHER COBRA-LIKE PROTEIN 15 454 - -
Dod05g1811 455 Pfam COBRA-like protein 62 225 IPR006918 GO:0010215|GO:0031225
Dod05g1811 455 PIRSF COBRA 12 455 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1811 Dod-Chr5 43586471 43589928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1811 4 454 COBRA Gene Family AT3G02210 73.451 0.0 723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1811 - - gmx:100811581 851.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1811 05 43586471 43589928 Dod05g1811 05 43586471 43589928 ECH
Dod05g1811 05 43586471 43589928 Dod09g0501 09 7616274 7617794 PCT