Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1805 ATGACTGAAAGTTCAAGTAAAGGTTATCAAGCCAAGCAAGAGGCTGGTGATAATAATACCATTAACAATACTATTGACAAATTCAAAGCAGCCTCTACTTCAAGACAATGGACAGCATTCAGGAATCCAAGAATTGTGAGAGTGTCACGCACTTTGGGAGGGAAAGATAGGCATAGCAAGGTTTGCACTATTAGGGGGCTGAGGGACCGGAGGATTAGGCTTTCTGTGCCCACAGCAATTCAGTTATATGATCTCCAAGACAGGCTTGGCCTCAGCCAACCTAGCAAGGTCATAGATTGGTTGCTTGAAGCCACAAAACTTGACATTGACAAGCTCCCACCACTTCAAATCCCTCAAGGTTTTGCTCAATTTCACCATCAAACCCTATTCCCCAATCATGAACCAAGTGCTGCCCCTCACCAGTTCTCTCTTGGAGGCAGCTTCTTTGATGGAGGAAACCAAAATCTACTGGCAAAGTCAAGGTGTTGGGACATGGATAATTCGGTAACTAGGCTAAGAGGTAAGGAAGCTGATCATCAAGGCGTGTCTATCTCTGAAAAGGGAAAGTGGATCAAAACAAATCAAGAAGAAAATCAAGATGGAATTGGTGATGGTGGTTATAATAGACAGGATTCAGCTCAGAAGCCTTTCCCCATTGGGACTAATCACAACTCTTCTTTATCTGGTTTGCTTAACATTAATTCCATGATGACATATAACTCCTACCATAATTTGGAGCCTTCAAGTCTAACTTTATCCCAATTTGGAACCCATGGATTAATGTTTCCATCACAATTAGATCCCCATCCAAGCAGTGGCGGTAGTGGTGGTTTGCAGTTTTCACCATCTTTGCCATCTGGTTCACAGCTACTTTTGTGTCCATCTTCAGCTACCCCATCACCACTTTTCACTCCTTATGCTCCTCCATTTATGGCTAACTCAACAGTAGAAAGTGATCCAAGACAATTCAACCATACTCAGATCTTGAGCCCAGGTTCTCAGGTCATGACTCATCCTCTCATCCCATCATCTCTTCATTCAATCAATTCGCCTCTCAGACGCCTTCCAACACCGTTTAGCTCCAAGCTTGTTGATTCAGATAACAACAATCGTAGTAGCCAACCAGATGATAAAGGTAGCACTCGTTCTTGA 1152 0.4323 MTESSSKGYQAKQEAGDNNTINNTIDKFKAASTSRQWTAFRNPRIVRVSRTLGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDRLGLSQPSKVIDWLLEATKLDIDKLPPLQIPQGFAQFHHQTLFPNHEPSAAPHQFSLGGSFFDGGNQNLLAKSRCWDMDNSVTRLRGKEADHQGVSISEKGKWIKTNQEENQDGIGDGGYNRQDSAQKPFPIGTNHNSSLSGLLNINSMMTYNSYHNLEPSSLTLSQFGTHGLMFPSQLDPHPSSGGSGGLQFSPSLPSGSQLLLCPSSATPSPLFTPYAPPFMANSTVESDPRQFNHTQILSPGSQVMTHPLIPSSLHSINSPLRRLPTPFSSKLVDSDNNNRSSQPDDKGSTRS* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1805 383 MobiDBLite consensus disorder prediction 1 21 - -
Dod05g1805 383 MobiDBLite consensus disorder prediction 347 383 - -
Dod05g1805 383 Pfam TCP family transcription factor 54 127 IPR017887 -
Dod05g1805 383 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 379 IPR005333 GO:0003700
Dod05g1805 383 MobiDBLite consensus disorder prediction 194 221 - -
Dod05g1805 383 ProSiteProfiles TCP domain profile. 54 112 IPR017887 -
Dod05g1805 383 MobiDBLite consensus disorder prediction 347 376 - -
Dod05g1805 383 PANTHER TRANSCRIPTION FACTOR TCP17 1 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1805 Dod-Chr5 43465693 43467837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1805 3 337 TCP Transcription Factor Family AT5G60970 41.243 7.02e-58 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Dod05g1805 TCP 5.8e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1805 - - gmx:100804574 404.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1805 05 43465693 43467837 Dod09g0492 09 7379530 7381509 PCT