Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1791 ATGGCGGCATCGTCGTCGTCGGCGAAGCGATGCCACTACGAGGTCTTGGGCGTCCCACGCGACTGCACCCCTGACGAGATCCGATCAGCTTACCGCCGCCTCGCCTTGCAGCGCCACCCAGACAAGCTCGTCCAATCCGGCCTCTCTCAATCCGAAGCCACCGCCCAGTTCCAAGAGCTCCAGCACGCCTACGAGGTCCTCTCTGACCCAAAAGAACGCTCCTGGTACGACTCCCACCGCTCCCAGATCCTCTTCTCCGACCCCAACTCCCTCCGCAACTCCTCTCTCCCCGACCTCTTCTCCTTCTTCTCCAACACCGTCTTCTCCGGCTACTCCGATTGCCCCAAAGGTTTCTACAACGTGTACTCCAAGGTATTCGACAAGATTCACGCTAATGAGCTAAATTTCGCGAAGAAATTAGGGTTAGGTGTTGATTCTGTCAGGCAGGCACCTGTTATGGGGAATTTGGAGAGTCCTTATGAGCAGGTGAGTGCTTTTTATGGTTACTGGTTAGGGTTTTCGACGGTTATGGATTTTTGCTGGGTTGATGAGTATGATGCTTCTGCGGGTCCCAATCGGAGGGCGAGGAGGTTGATGGAGGAGGAGAACAACAAGTTGAGGAGGAAGGCAAGGAGGGAGTACAATGACACTGTGAGGAGGTTGGGGGATTTTGTGAAGAAGAGAGATAAGAGGGTGATTGATATGAAGGTGAGGAAGGAGAAGGAGGAGGAGAGAAGGAAAGAGGAGGAGAGGGAGAGGAAGAGGAGGTTGGAGAAGGAGAAGAAGGAGAGGGCTATGGCTTATGAGGAGCCGGATTGGGCTAAGGTTGAGGAGGATGAGGATGAGGGGGGCGGTGGTGATGGGGATGAGTTTTGGTTTGAGGAGGAGGAGGGGAAGAAGGGGGGTGGTGGTGGTGAGAAGGAGTTTTATTGTGTGTTGTGTGGGAAGAAGTTCAAGAGTGAGAAGCAGTGGAAGAACCATGAACAGTCCAAGAAGCACAAGGAGAAGGTCGCAGAGTTCAGGGATTCGATTGCGGATGAAGAGGAGGATTTGGAGGTGGAAGGAGGAGAAGGGGAGGAAGGGTTGGAAAGTGAGGGGGATGGAGTTCGGATGAGCGGCGATCGTTTGGGGGAGAGTGATTATGGGGTTGGGGATTTGGAGGGTAGGATTAGAGATGATCTAAATGTTGTGGAGGAGGAGACTAAGAATGGGGTTGAGCTGAGTGATGATGATGACGAAGACGAAGACGATGATGAATTCTATGATGCTCCACGTGGTAAGGAAGGGAATGTGGCTGGTGTGTCAGTAGATTTTGATGATGATGATGTTCTTGAAGCAATGGTGGCTGGGCACAAGAGTAGAAAACCTCGGGCTTCAACGCACAAGCCCAAAGCTTCGGTGGCTCCAATTAAAATTGAGGATAACGATGATGGGGTTGGGTCTATGGAATATGACAACAGAAAGAGCACGAGAAAGAAACGTGGTGCCAAGAAAGAGAAGGGTAGGAAAAATAGGGAAGAATCTCATGTGGCTACTGTCAACGGGGATGAAGAGAGTACTAACAATAATGGGAATGAGAGTTGTTATGCAGAGGAGTCTTCTTCCCAATGTTTTGTGGAAACTGAGAGTAACGGTAAAGAGAATGAGCATGTCGGTAGAGATAGGAAGACTTCAAATCAACCTGCTGATAAAAAGGGAACTGCAAGGGACACGAAAACCAAAGCAAAAACTTCATCCAAAGGAAGAAAAGCCAAGGTGACATCAAAGAATCTTGGCAATATTTGTGAGGCCTGTGGAGAGGAGTTTGATTCAAGGAATAAATTACATAAACATCTAGGCGATTCTGGGCATGCGACATTAAAAAGTAGATAA 1872 0.4973 MAASSSSAKRCHYEVLGVPRDCTPDEIRSAYRRLALQRHPDKLVQSGLSQSEATAQFQELQHAYEVLSDPKERSWYDSHRSQILFSDPNSLRNSSLPDLFSFFSNTVFSGYSDCPKGFYNVYSKVFDKIHANELNFAKKLGLGVDSVRQAPVMGNLESPYEQVSAFYGYWLGFSTVMDFCWVDEYDASAGPNRRARRLMEEENNKLRRKARREYNDTVRRLGDFVKKRDKRVIDMKVRKEKEEERRKEEERERKRRLEKEKKERAMAYEEPDWAKVEEDEDEGGGGDGDEFWFEEEEGKKGGGGGEKEFYCVLCGKKFKSEKQWKNHEQSKKHKEKVAEFRDSIADEEEDLEVEGGEGEEGLESEGDGVRMSGDRLGESDYGVGDLEGRIRDDLNVVEEETKNGVELSDDDDEDEDDDEFYDAPRGKEGNVAGVSVDFDDDDVLEAMVAGHKSRKPRASTHKPKASVAPIKIEDNDDGVGSMEYDNRKSTRKKRGAKKEKGRKNREESHVATVNGDEESTNNNGNESCYAEESSSQCFVETESNGKENEHVGRDRKTSNQPADKKGTARDTKTKAKTSSKGRKAKVTSKNLGNICEACGEEFDSRNKLHKHLGDSGHATLKSR* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1791 623 MobiDBLite consensus disorder prediction 514 542 - -
Dod05g1791 623 SMART ZnF_U1_5 306 340 IPR003604 GO:0003676|GO:0008270
Dod05g1791 623 SMART dnaj_3 10 72 IPR001623 -
Dod05g1791 623 PRINTS DnaJ domain signature 31 46 IPR001623 -
Dod05g1791 623 PRINTS DnaJ domain signature 52 72 IPR001623 -
Dod05g1791 623 PRINTS DnaJ domain signature 13 31 IPR001623 -
Dod05g1791 623 SUPERFAMILY Chaperone J-domain 8 112 IPR036869 -
Dod05g1791 623 Coils Coil 192 216 - -
Dod05g1791 623 MobiDBLite consensus disorder prediction 543 577 - -
Dod05g1791 623 MobiDBLite consensus disorder prediction 344 362 - -
Dod05g1791 623 Pfam DnaJ domain 12 77 IPR001623 -
Dod05g1791 623 Coils Coil 330 350 - -
Dod05g1791 623 ProSitePatterns Zinc finger C2H2 type domain signature. 595 617 IPR013087 -
Dod05g1791 623 ProSiteProfiles Zinc finger C2H2 type domain profile. 593 622 IPR013087 -
Dod05g1791 623 MobiDBLite consensus disorder prediction 467 490 - -
Dod05g1791 623 ProSiteProfiles Zinc finger C2H2 type domain profile. 309 338 IPR013087 -
Dod05g1791 623 Gene3D DnaJ domain 1 92 IPR036869 -
Dod05g1791 623 ProSiteProfiles dnaJ domain profile. 11 80 IPR001623 -
Dod05g1791 623 MobiDBLite consensus disorder prediction 404 421 - -
Dod05g1791 623 Pfam Zinc-finger double-stranded RNA-binding 309 334 IPR022755 -
Dod05g1791 623 SMART c2h2final6 309 333 IPR013087 -
Dod05g1791 623 SMART c2h2final6 593 617 IPR013087 -
Dod05g1791 623 MobiDBLite consensus disorder prediction 324 589 - -
Dod05g1791 623 MobiDBLite consensus disorder prediction 324 343 - -
Dod05g1791 623 Gene3D Classic Zinc Finger 297 358 - -
Dod05g1791 623 PANTHER DNAJ PROTEIN JJJ1 HOMOLOG 5 623 IPR044648 -
Dod05g1791 623 MobiDBLite consensus disorder prediction 239 272 - -
Dod05g1791 623 Coils Coil 232 267 - -
Dod05g1791 623 CDD DnaJ 11 69 IPR001623 -
Dod05g1791 623 SUPERFAMILY beta-beta-alpha zinc fingers 303 351 IPR036236 -
Dod05g1791 623 MobiDBLite consensus disorder prediction 273 292 - -
Dod05g1791 623 ProSitePatterns Zinc finger C2H2 type domain signature. 311 333 IPR013087 -
Dod05g1791 623 MobiDBLite consensus disorder prediction 363 403 - -
Dod05g1791 623 MobiDBLite consensus disorder prediction 239 306 - -
Dod05g1791 623 ProSitePatterns Nt-dnaJ domain signature. 57 76 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1791 Dod-Chr5 43331946 43334999 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1791 1 623 C2H2 Transcription Factor Family AT1G74250 49.094 5.28e-180 522
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dod05g1791 DnaJ 2.7e-22 CL0392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1791 K09506 - gmx:100788305 832.787