Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1768 ATGTGGATGGGGTTTGCAAGCTTGAAAGAGTTTTCTGTTGCTGAGAACCACCTCATTGGGGCTATTCCTTCGGAGGCTTTTCCATGGAATTGTAGCCTTGTGGAACTAGACCTTTCACAAAATGGGTTTGTTGGTGAGGCACCAAAGGGGGTTGCCAACTGCAGGAATTTAACAATGCTGAATCTTTCTAGTAACAATTTTACTGGGGGCATTCCCTTTGAAATAGGATCCATTTCTGGCCTTCAAGGATTGTACTTGGGGAATAACAGCTTTTCAAGAAATATCCCAGATTCCCTTCTGAACTTGACCAATCTGGTTTTCTTGGATTTGAGCAGGAACCAGTTTGGTAGTGACATACAAGAGATATTTGGGAAATTCAAGCAAGTGAGCTTTCTTCTGTTGCACTCAAATAATTACACTGGAGGATTGTTCTCCTCGGGAATTCTTGCATTGCCTAACATTTCCCGCTTAGACTTAAGCTTCAACAACTTTTCAGGTCCGTTACCTGTTGAGATTTCTCAGATGTCAAGTCTTCAGTTCTTGATGTTATCCTACAACCAGTTCAGTGGGCCTATTCCTCCTGAATTTGGGAATATGCGTCGTCTGCAAGCACTTGACCTTGCCTTCAACAATTTGAGTGGGCCAATCCCACCCAGCCTTGGCAACTTGACTTCCCTCTTATGGTTAATGCTTGCAGATAATTCATTAACTGGAGAAATCCCTAGAGAGTTGGGAAACTGCACAAGCTTGTTGTGGTTGAACCTTGCCAACAATAAGCTCTCCGGGAATTTGCCTCCTGAACTGTCCAAAATTGGAAGGAATGCCATGACAACATTTGAATTGAATAGAAAACATGATCGAATCATCGCCGGCTCTGGTGAATGTTTAGCAATGAAGAGATGGATACCTGCAGATTACCCTCCATTCAGCTTCGTGTATAGCCTCTTAACAAGGAAGAACTGCAGAGACCTTTGGGACAAATTGCTCAAAGGACATGGTCTTTTCCCGTTTTGTGCGCCAGGGTCCTCCCTTCGCACACTCCAGATATCCGGGTATGTTCAGCTTAGTGGGAACAATCTGAATGGTGAAATTCCCTCTGAAATTGGGACAATGATGAACTTCAGTTTGTTGCACTTGGGGTTCAACAACTTCTCTGGGAAATTCCCTCCAGAGTTGGGAAGCATGCCACTTGTGGTCTTGAACATGACCAGGAACAAGTTTTCAGGTGAAATCCCCTTGGAAATTGGCAACTTGAAATGTCTGCTGAATCTGGATTTGTCTTACAACAACTTCTCTGGCGCATTTCCCACAAGTTTGAAAAGCTTGGCTGAGCTTAGCAAGTTCAACATCTCATACAATCCCTTTATATCTGGTGTAGTACCATCAACCGGACAATTTAATACATTCGATAGAGATTCATACTTAGGTGACCCCCTCTTGGTCCTTCCCCAGTTCATTTATATCACCACAAATGATAAGAACACGACCATGCACCATGACCACAAGAAGACATCAAAATTGTCTGTGTTTTTGGTGTTTGCAGCTATAACACTGTCTTTCGTGGTGTTTGGCCTTCTTTCTTTTATAGTCTGTGTATTGCCAAAGACCCCTTCAGAGGAACCAGCATACCTCTTGAGGGATACAAAACAGTGGCATGATTCTAGCAGCTCAGGATCGTCACCATGGTTGTCTGACACAGTTAAGGTCATCCGCTTGAACAAGACAGCTTTTACCCATGTTGACATTTTGAAAGCAACAGGGAGCTTCTCAGAGGACAGAATTATAGGCAAAGGGGGGTTTGGAACAGTGTACAAGGGAGTGTTTCCAGATGGAAGAGAAGTAGCAGTGAAGAAGCTCCAAAGGGAAGGACTTGAGGGTGAGAAGGAGTTCAAGGCTGAAATGGAGGTTCTGAGTGGTCATGGTTTTGGTTGGCCTCATCCAAACCTGGTCACACTCTACGGGTGGTGCCTAAATGGTTCAGAGAAGATACTAGTCTACGAGTACATAGAAGGTGGGAGCTTGGAGGATCTAGTGACTGATAGAACGCGCTTGACATGGAAGAGGAGGCTAGAAGTGGTACTTGATGTTGCAAGGGCACTAGTCTATTTGCACCATGAATGCTACCCTCCTGTTGTGCATAGAGATGTTAAGGCTAGCAATGTGTTGCTAGACAAGGATGGGAAGGCCAAAGTCACAGACTTTGGACTTGCTAGAGTGGTTGATGCTGGGGATAGCCATGTGAGCACAATGGTGGCTGGCACAGTGGGTTATGTTGCGCCTGAATATGGACAGACATGGCAAGCCACAACAAAAGGAGATGTGTACAGCTTTGGGGTGCTGGCTATGGAGCTGGCTACAGGGAGGAGAGCAGTGGATGGAGGGGAAGAGTGCTTGCTGGAATGGGCTAGGCGCGTCATGGGTCATGGAAGACATCATCATGGGTTAGGCCGTTCGTTACCGGCTTTGTTGATGGGTTCTGGGCTTGTTGGTGGGGCAGAGGAGATGGGTGAATTGCTAAGAATTGGGGTGAAGTGCACTGCTGAGGCACCCCATGCTAGGCCAAACATGAAGGAGGTTCTAACTATGCTGATTAGGATATACAGTCCCAAGGGAGATCCAAGTTATGGATATGTTTAG 2637 0.4558 MWMGFASLKEFSVAENHLIGAIPSEAFPWNCSLVELDLSQNGFVGEAPKGVANCRNLTMLNLSSNNFTGGIPFEIGSISGLQGLYLGNNSFSRNIPDSLLNLTNLVFLDLSRNQFGSDIQEIFGKFKQVSFLLLHSNNYTGGLFSSGILALPNISRLDLSFNNFSGPLPVEISQMSSLQFLMLSYNQFSGPIPPEFGNMRRLQALDLAFNNLSGPIPPSLGNLTSLLWLMLADNSLTGEIPRELGNCTSLLWLNLANNKLSGNLPPELSKIGRNAMTTFELNRKHDRIIAGSGECLAMKRWIPADYPPFSFVYSLLTRKNCRDLWDKLLKGHGLFPFCAPGSSLRTLQISGYVQLSGNNLNGEIPSEIGTMMNFSLLHLGFNNFSGKFPPELGSMPLVVLNMTRNKFSGEIPLEIGNLKCLLNLDLSYNNFSGAFPTSLKSLAELSKFNISYNPFISGVVPSTGQFNTFDRDSYLGDPLLVLPQFIYITTNDKNTTMHHDHKKTSKLSVFLVFAAITLSFVVFGLLSFIVCVLPKTPSEEPAYLLRDTKQWHDSSSSGSSPWLSDTVKVIRLNKTAFTHVDILKATGSFSEDRIIGKGGFGTVYKGVFPDGREVAVKKLQREGLEGEKEFKAEMEVLSGHGFGWPHPNLVTLYGWCLNGSEKILVYEYIEGGSLEDLVTDRTRLTWKRRLEVVLDVARALVYLHHECYPPVVHRDVKASNVLLDKDGKAKVTDFGLARVVDAGDSHVSTMVAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRAVDGGEECLLEWARRVMGHGRHHHGLGRSLPALLMGSGLVGGAEEMGELLRIGVKCTAEAPHARPNMKEVLTMLIRIYSPKGDPSYGYV* 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1768 878 SMART LRR_typ_2 102 125 IPR003591 -
Dod05g1768 878 SMART LRR_typ_2 223 247 IPR003591 -
Dod05g1768 878 SMART LRR_typ_2 175 198 IPR003591 -
Dod05g1768 878 SMART LRR_typ_2 199 222 IPR003591 -
Dod05g1768 878 Gene3D Phosphorylase Kinase; domain 1 555 668 - -
Dod05g1768 878 Pfam Leucine rich repeat 200 260 IPR001611 GO:0005515
Dod05g1768 878 Gene3D Ribonuclease Inhibitor 3 288 IPR032675 -
Dod05g1768 878 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 1 870 - -
Dod05g1768 878 SUPERFAMILY RNI-like 216 458 - -
Dod05g1768 878 CDD STKc_IRAK 595 866 - -
Dod05g1768 878 Pfam Protein kinase domain 590 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g1768 878 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 870 - -
Dod05g1768 878 ProSitePatterns Serine/Threonine protein kinases active-site signature. 711 723 IPR008271 GO:0004672|GO:0006468
Dod05g1768 878 SMART serkin_6 589 870 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g1768 878 SUPERFAMILY L domain-like 13 272 - -
Dod05g1768 878 ProSitePatterns Protein kinases ATP-binding region signature. 595 618 IPR017441 GO:0005524
Dod05g1768 878 ProSiteProfiles Protein kinase domain profile. 589 875 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g1768 878 SUPERFAMILY Protein kinase-like (PK-like) 571 864 IPR011009 -
Dod05g1768 878 Gene3D Ribonuclease Inhibitor 330 497 IPR032675 -
Dod05g1768 878 Gene3D Transferase(Phosphotransferase) domain 1 669 872 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1768 Dod-Chr5 43100454 43104517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1768 2 863 Receptor kinase-like Gene Family AT1G55610 33.297 2.18e-133 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Dod05g1768 Pkinase 2.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1768 - - gmx:100816573 1454.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1768 05 43100454 43104517 Dod05g1768 05 43100454 43104517 ECH