Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1764 ATGGGGTGCGTGGTGGTGAAGCAAGGGGTGTCAGTGACGCCGGCGGGGGACAACTCGGGCGAGTCGGAGAGGAACAGGAGGAAGAAGGGCGACTCAGTGATGGGAGCGAGTCGGAGCGAGTTGGGTGAATCAGGGAGGGCGAGTTCGAATGGTGGTGGTGGAGGGAGCGAGTCGCTGAGCTTCAGGCTGGTGGGGAACCTGCACAAGTACGTGGAAGGGGAGCAGGCGGCGGCGGGCTGGCCGGCTTGGCTCAGCGCCGTCGCCGCCGAAGCCATTCAGGGGTGGGTGCCCCTCCGAGCTGATGCATTTGAGAAGCTTGAGAAGATTGGGCAGGGTACATATAGCAGTGTTTTCAGAGCGAGGGAGCTTGAGACTGGGAGGATAGTGGCCCTTAAGAAGGTGAGATTTGACAATTTTGAGCCAGAGAGTGTCAGGTTCATGGCACGAGAAATAATGATACTCAGAAGGCTTGATCATCCAAACATCATTAAACTGGATGGGTTGGTTACTTCCAGATTGTCTTGCAGCATATACCTTGTGTTTGAGTACATGCAGCATGACATCACGGGGCTATTGTCTAGACCAGAAATCACGTTTAGCGAGTCACAGATTAAATGCTACATGAAACAGTTGTTATCCGGTCTTGAGCAATGTCACTCACGAGGTGTAATGCACAGAGACATCAAGGGATCGAATCTTCTGGTGAATGATGAAGGGATATTGAAGGTGGCAGATTTTGGATTGGCGAATTTCTGCAAATCAGGGAACAAGCAACCCCTGACCAGCCGTGTTGTCACCTTGTGGTACCGCCCACCTGAACTCTTGCTTGGCTCAACAGATTATGGTCCATCTGTGGATCTCTGGAGTGTTGGCTGTGTATTTGCAGAGCTACTTATTGGGAAGCCTATACTTCAGGGGAGAACTGAGGTTGAACAATTGCACAAAATCTTCAAGCTTTGTGGCTCCCCACCTGATGAATACTGGAAAAAGACCAGACTTCCTCATGCAACTTTGTTCAAGCCACAACAACCATATCATAGTTGCCTCCGAGAGACATTTAAAGATTTACCTGCAACCAGTGTGAATCTGCTACAAACTCTTCTTTCTGTCGAACCAAACAAACGCGGGACTGCCGCATCTGCTCTCTCATCTGAGTATTTCAAAACAAAACCTTATGCATGTGACCCATCAAGCATGCCAATATACCCGCCCAGCAAGGAGATTGATGCAAAACACCAGGAGGAGTCAAGAAGGAAAAAGATTAGTGGGAGAGCTTGTGGAGCAGAAACAAGAAAACCTTCAAGAAAGCCACTAGCACTCAGTAAATTAGCCCCAGCTGAGGATTTGACAAGTCAAATTCATACTTCCCAAAAGCCAAAGGTGGATGATAGCTCTGTCCTAGTCCTAAAAGAAGAGGTCACTAACATGGGAGAGGAGGCGCCGAAGCTATCTAGTGATAAACCAGAAGATGCTTCCCATATGAAGATTGCATCCAAAGCAGATATTCCCTTTCCTGGACCATTACAAGTTTCAAAATCAAGTGGCTTTGCATGGGCGAAAAGGCGTAAGGATGACACTTTAATGAGATCACATTGTCGATCTATTTCAAGAGGGCACTTTTTTAATTCGTTAGAAACTTCTGCACTAAATTCAAGGAACAATTCTGAGTCCAGAAACCATGAAAATAAGGAATTATGTGGGGGACAGACCAACTCTAGCGGCCACGACCTGCTTGAAATCTCTAAGCTTGTAATGCAAAACCAATGGAGTAGGTTTGATCGTCCTGACTCATTTGATACTTCTGATGAGTACCATTCACAGGAACTCTCTATGGCACTTTATCACAGAGAAGATTCATTATCCAAGAGAAGTAACCTGAGTTCTCAGGATCAAGGAGATAAGGTTGAATTTTCAGGACCCCTAATATCCCAAATGCACACGGTTGATGAGCTCTTAGAAAGACATGAGCGTCACATAAGGCTTACTGTGCGAAGATCATGGTTTCAGAAAGGTAAGAAGAATGAGAAGTAA 2031 0.4692 MGCVVVKQGVSVTPAGDNSGESERNRRKKGDSVMGASRSELGESGRASSNGGGGGSESLSFRLVGNLHKYVEGEQAAAGWPAWLSAVAAEAIQGWVPLRADAFEKLEKIGQGTYSSVFRARELETGRIVALKKVRFDNFEPESVRFMAREIMILRRLDHPNIIKLDGLVTSRLSCSIYLVFEYMQHDITGLLSRPEITFSESQIKCYMKQLLSGLEQCHSRGVMHRDIKGSNLLVNDEGILKVADFGLANFCKSGNKQPLTSRVVTLWYRPPELLLGSTDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDEYWKKTRLPHATLFKPQQPYHSCLRETFKDLPATSVNLLQTLLSVEPNKRGTAASALSSEYFKTKPYACDPSSMPIYPPSKEIDAKHQEESRRKKISGRACGAETRKPSRKPLALSKLAPAEDLTSQIHTSQKPKVDDSSVLVLKEEVTNMGEEAPKLSSDKPEDASHMKIASKADIPFPGPLQVSKSSGFAWAKRRKDDTLMRSHCRSISRGHFFNSLETSALNSRNNSESRNHENKELCGGQTNSSGHDLLEISKLVMQNQWSRFDRPDSFDTSDEYHSQELSMALYHREDSLSKRSNLSSQDQGDKVEFSGPLISQMHTVDELLERHERHIRLTVRRSWFQKGKKNEK* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1764 676 ProSitePatterns Protein kinases ATP-binding region signature. 109 132 IPR017441 GO:0005524
Dod05g1764 676 MobiDBLite consensus disorder prediction 408 431 - -
Dod05g1764 676 Gene3D Transferase(Phosphotransferase) domain 1 186 426 - -
Dod05g1764 676 Pfam Protein kinase domain 103 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g1764 676 MobiDBLite consensus disorder prediction 551 572 - -
Dod05g1764 676 SUPERFAMILY Protein kinase-like (PK-like) 97 394 IPR011009 -
Dod05g1764 676 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 31 669 - -
Dod05g1764 676 MobiDBLite consensus disorder prediction 20 34 - -
Dod05g1764 676 MobiDBLite consensus disorder prediction 1 55 - -
Dod05g1764 676 MobiDBLite consensus disorder prediction 408 434 - -
Dod05g1764 676 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672|GO:0006468
Dod05g1764 676 Gene3D Phosphorylase Kinase; domain 1 90 185 - -
Dod05g1764 676 SMART serkin_6 103 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g1764 676 PANTHER CELL DIVISION PROTEIN KINASE 31 669 - -
Dod05g1764 676 ProSiteProfiles Protein kinase domain profile. 103 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g1764 676 CDD STKc_CDK9_like 103 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1764 Dod-Chr5 43055032 43060483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1764 95 447 Core Cell Cycle Gene Families AT5G10270 48.509 5.63e-112 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Dod05g1764 Pkinase 1.5e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1764 - - aip:107633955 1104.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1764 05 43055032 43060483 Dod02g2446 02 53815396 53821795 ECH
Dod05g1764 05 43055032 43060483 Dod05g1764 05 43055032 43060483 ECH