Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1758 ATGGAGAGTGAGAAGGGGGAGCTGAATTTGAACAACAAAGAGAGTAATACCACTAACTGTGGTGGAGGAAGTAATAGTAAGGGTGGGGGTGGTGGTGGTGATGGGTTCATTGATAGAAGCAAAGTTAGGATTTTGTTGTGTGATAATGATTCTAAGAGCTCTGAAGAGGTTTCAACTCTTCTTATGCGTTGCTCTTATCAAGTTACTTCAGTAAAGTCAGCAAGGCAAGTAATTGATGCACTGAATGCAGAGCGCCAATACATAGATATCATACTAGCTGAAGTTGACCTTCCAATAAAGAAGGGCATGAAGATGTTGAAGTACATAGCACGTGATAAAGAATTGCGCCGAATTCCTGTTATAATGATGTCTGCTCAAGATGAGGTATCCATTGTTGTTAAGTGCTTGAAACTTGGAGCAGCAGACTATCTAGTTAAGCCTTTACGCACTAATGAACTATTAAATTTGTGGACGCACATGTGGAGAAGGAGACGCATGCTTGGACTTGTAGAGAATAACATCTTGAATTGTGACTTTGACCTGGTAGCATCAGACCCAAGTGATGCCAACACAAACAGTACCACCTTGTTCTCTGATGACACAGATGATAAGTCCAAAAGAAGCAGTAATCCAGAGGCAGGAATATCAATCCAACAAGAACAAGAGGTTACTATTGCCATGGATACTGCTGTTTTTGAGGAGCTTCCAGATGCTTATGTATCAGAATATCAGCCTGATGTGCCAGGAATTAGTGATCGCCGAACAGGTCCTCAAGCGAAGCATCCATCATGCAACAAAATTACTGATGGTTATTTTTCATCTGGTCCGAAGAAGAGTGAACTAAGGATTGGAGAATCATCGGCCTTCTTCACTTATGTCAAAGCAGCAACACTAAAGAGCAACTTTGAAGAGACTGTCCAGGTTGACAAGAATGCTACTAAACAAATGAGGATGGAAGATATGATGAATCAAGCCTGTGCTCAACAGAGGGACAACCTTCAAAGGCATGAAAATGGAGAAACATTTGAAAGTCATTCACAAGATGGCTTACCCAGCGGCAATAGTATGCCTGATTCTTTCTCTATTGAGAGGTCTTGTACTCCACCTGCATCAATGGAAGTTTCACAGCAAAAGCATTATAAGGAAGAGCATCTTCAGGGTGCGGTGCATCCAACAAATGGAACTCATGGTTCTGAGCCTGAAGCTTCTGGCATGACTGCCCAACATGCTTATCCATATTATATTTCAGGAGTTGTTAATCATGTTATGATGCCACAATCAGCACAAATGTATCAAAAGAATATTCAGGAGCTACAGAGTCATGCTAACTCATCTATTATTGCACCATACAATCATCTTCCCCAATTTCCCCCTCATGCAACTGGGATGGCATCTTTTCCATATTATCCAATGAGTATATGCGTACAACCTGGTCAGATCCCTACGAATCATTCATGGCCACCATTAGGAAATTCAAGTTCATCTGAGGCAAAGTTAAGCAAAGTTGATAGAAGAGAAGCAGCATTAATGAAGTTTAGACAGAAAAGGAAAGAGCGTTGCTTTGATAAGAAAATTAGATACGTCAATCGAAAAAGACTTGCTGAAAGGCGACCTCGTGTAAGGGGACAGTTTGTCAGAAAGTTGAATGGTGTTGATGTTGATCTTAATGGACAACCCGCTTCCACTGATTATGATGATGATGATGATGATGAAGAGGAGGAAGACAACAATGCAGCAAGAGATTCCTCTCCTGAGGATGCATGA 1764 0.4127 MESEKGELNLNNKESNTTNCGGGSNSKGGGGGGDGFIDRSKVRILLCDNDSKSSEEVSTLLMRCSYQVTSVKSARQVIDALNAERQYIDIILAEVDLPIKKGMKMLKYIARDKELRRIPVIMMSAQDEVSIVVKCLKLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLVENNILNCDFDLVASDPSDANTNSTTLFSDDTDDKSKRSSNPEAGISIQQEQEVTIAMDTAVFEELPDAYVSEYQPDVPGISDRRTGPQAKHPSCNKITDGYFSSGPKKSELRIGESSAFFTYVKAATLKSNFEETVQVDKNATKQMRMEDMMNQACAQQRDNLQRHENGETFESHSQDGLPSGNSMPDSFSIERSCTPPASMEVSQQKHYKEEHLQGAVHPTNGTHGSEPEASGMTAQHAYPYYISGVVNHVMMPQSAQMYQKNIQELQSHANSSIIAPYNHLPQFPPHATGMASFPYYPMSICVQPGQIPTNHSWPPLGNSSSSEAKLSKVDRREAALMKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKLNGVDVDLNGQPASTDYDDDDDDEEEEDNNAARDSSPEDA* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1758 587 MobiDBLite consensus disorder prediction 10 25 - -
Dod05g1758 587 MobiDBLite consensus disorder prediction 548 587 - -
Dod05g1758 587 PANTHER RESPONSE REGULATOR AND TRANSCRIPTION FACTOR RR-A-TYPE FAMILY-RELATED 7 570 - -
Dod05g1758 587 PANTHER TWO-COMPONENT RESPONSE REGULATOR 7 570 IPR045279 GO:0009736
Dod05g1758 587 MobiDBLite consensus disorder prediction 344 374 - -
Dod05g1758 587 MobiDBLite consensus disorder prediction 248 271 - -
Dod05g1758 587 SMART REC_2 42 157 IPR001789 GO:0000160
Dod05g1758 587 ProSiteProfiles Response regulatory domain profile. 43 161 IPR001789 GO:0000160
Dod05g1758 587 ProSiteProfiles CCT domain profile. 505 547 IPR010402 GO:0005515
Dod05g1758 587 MobiDBLite consensus disorder prediction 190 216 - -
Dod05g1758 587 Pfam CCT motif 505 547 IPR010402 GO:0005515
Dod05g1758 587 Gene3D - 42 237 - -
Dod05g1758 587 MobiDBLite consensus disorder prediction 340 381 - -
Dod05g1758 587 SUPERFAMILY CheY-like 40 167 IPR011006 -
Dod05g1758 587 Pfam Response regulator receiver domain 44 155 IPR001789 GO:0000160
Dod05g1758 587 MobiDBLite consensus disorder prediction 561 579 - -
Dod05g1758 587 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1758 Dod-Chr5 42992271 42998266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1758 32 586 Response Regulator Gene Family AT5G61380 46.880 1.47e-166 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Dod05g1758 Response_reg 1.4e-18 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1758 K12127 - gmx:100786522 869.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1758 05 42992271 42998266 Dod05g1758 05 42992271 42998266 ECH