Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1751 ATGGAAAACGTTTCAGTGTCGTGCAAGGAAGAGGAGCAGATGGATTTGCCACCTGGGTTTCGGTTCCACCCAACAGATGAAGAGCTCATAAGCCATTACCTCTGCAAGAAGGTCATTGACACCAACTTCACAGCCAGGGCCATTGGTGAGGCCGACCTCAACAAATCCGAGCCTTGGGATTTGCCTAGGAAAGCCAAAATGGGAGAAAAGGAGTGGTACTTTTTCTGCGTGAGGGACAGGAAGTACCCAACGGGGTTGAGGACTAACCGAGCCACCGATACTGGGTACTGGAAGGCCACAGGAAAAGACAAGGAAATTTTCAGAGGGAAATCGCTGGTTGGAATGAAGAAAACTCTGGTTTTCTACAAAGGAAGGGCACCCAAAGGAGAGAAGAGCAACTGGGTCATGCACGAGTACAGGCTCGACGGCAAATTCTCGGTCCACAACCTACGCGAAACTGCAAAGAACGACTGGGTGATTTGCAGGGTGTTTCAGAAGGGCTCAGCTGCGAAGAAGATTCATATCTCCGGGATCATGAGGTTGGACTCTTTTGGAACTGACTTGGGCTCTTCTGGTTTACCACCCTTGACAGATTCTTCACCTTCTTCTTTTGGCAACAACAAGACCAAAGCAATCACTGAATCGGCTTACGTGCCCTGCTTCTCCAATCCTATTGATGTTCAAAGAAACCAAGGTGGTGGTTGTGGTGGTGGTGGTGGATTCTTTGATTCCTTCACCAACTCCTTTTATGGGGTGTCTTCAAATTCAAACCCATTAGACGTTCATCCAAGAATGCCACTTTCAACTTCCTGCTTCTACTCTACCCAACAAGGCCTTCAGAACTTGTCATTGCCCGGTTCTTCTGCTCAGGACCAGGTGACAATCCAGAGGGCCTTGTATGGATCAAACTTGGCGAGTGGATTTAAATCCGAAAGGGAAATGATCAGTGTCTCACAGGAGACATGCCTCAGCACTGAGATGAACGCGGACACAACCTCTTCGGTGGTATCAAATTTTGATATGGGGAGGGGGTGCTTTGACAGTCAGCACAACCCTCGTGTTTCTGCTGCAGCAGTGGACCTTGAAAGTGTGTGGAATTACTAA 1104 0.4855 MENVSVSCKEEEQMDLPPGFRFHPTDEELISHYLCKKVIDTNFTARAIGEADLNKSEPWDLPRKAKMGEKEWYFFCVRDRKYPTGLRTNRATDTGYWKATGKDKEIFRGKSLVGMKKTLVFYKGRAPKGEKSNWVMHEYRLDGKFSVHNLRETAKNDWVICRVFQKGSAAKKIHISGIMRLDSFGTDLGSSGLPPLTDSSPSSFGNNKTKAITESAYVPCFSNPIDVQRNQGGGCGGGGGFFDSFTNSFYGVSSNSNPLDVHPRMPLSTSCFYSTQQGLQNLSLPGSSAQDQVTIQRALYGSNLASGFKSEREMISVSQETCLSTEMNADTTSSVVSNFDMGRGCFDSQHNPRVSAAAVDLESVWNY* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1751 367 PANTHER NAC DOMAIN-CONTAINING PROTEIN 100 6 363 - -
Dod05g1751 367 Pfam No apical meristem (NAM) protein 17 141 IPR003441 GO:0003677|GO:0006355
Dod05g1751 367 Gene3D NAC domain 25 170 IPR036093 GO:0003677|GO:0006355
Dod05g1751 367 SUPERFAMILY NAC domain 12 166 IPR036093 GO:0003677|GO:0006355
Dod05g1751 367 ProSiteProfiles NAC domain profile. 16 166 IPR003441 GO:0003677|GO:0006355
Dod05g1751 367 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1751 Dod-Chr5 42939033 42941125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1751 14 367 NAC Transcription Factor Family AT5G07680 57.263 2.52e-129 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod05g1751 NAM 2.8e-39 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1751 05 42939033 42941125 Dod02g2465 02 54262784 54264762 ECH
Dod05g1751 05 42939033 42941125 Dod05g1751 05 42939033 42941125 ECH