Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1741 ATGATGATGGGAAATAGGAAGGTGAAGCGAGTCAGAGAAGAGAAGAGTAGTAGCAGCACCAAAATGTTGTCAAGGAAGACCATATCTCAGTACTTCTACATGCCCATAACACAAGCAGCCAAAGAGCTTGATGTGGGCCTAACACTTTTGAAGAAAAGGTGCAGGGAATTGGGAATTCAGAGGTGGCCCCATCGGAAACTCATGAGCCTTCAAACACTAATAAATAACGTGCAGGAGATCGGGAAGGAGGAGGAGCCAGAGAGTGAAGAGAAGCTAAGGAATGCAATTGACATATTGGAGAAGGAAAAGAAGCTTCTGGAGGAAATGCCTGACATGCAACTAGAAGACAATACTAAAAGGCTAAGACAAGCATGCTTTAAGGCCAATTACAAGAAAAGGAAGCTCATGGGTTCAATGGAGTCACAGTCTTGTTCTCTCAGTGGCTGCGCAAGAAATATTAGCACAAAGAGTGATGATTTCAGTTTTGATGAAGAAGAACGAGATATTAAATCTGTGTTTTCTGACCCGAGTGCATCTTGCAACATGATGATCTAG 555 0.4288 MMMGNRKVKRVREEKSSSSTKMLSRKTISQYFYMPITQAAKELDVGLTLLKKRCRELGIQRWPHRKLMSLQTLINNVQEIGKEEEPESEEKLRNAIDILEKEKKLLEEMPDMQLEDNTKRLRQACFKANYKKRKLMGSMESQSCSLSGCARNISTKSDDFSFDEEERDIKSVFSDPSASCNMMI* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1741 184 Coils Coil 89 109 - -
Dod05g1741 184 ProSiteProfiles RWP-RK domain profile. 6 90 IPR003035 -
Dod05g1741 184 PANTHER PROTEIN RKD4 10 147 IPR044607 GO:0003700
Dod05g1741 184 MobiDBLite consensus disorder prediction 1 20 - -
Dod05g1741 184 PANTHER PROTEIN RKD1-RELATED 10 147 - -
Dod05g1741 184 Pfam RWP-RK domain 23 70 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1741 Dod-Chr5 42849412 42850155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1741 9 137 AtRKD Transcription Factor Family AT1G18790 67.176 1.13e-57 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Dod05g1741 RWP-RK 1.5e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1741 - - adu:107470725 226.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1741 05 42849412 42850155 Dod05g1741 05 42849412 42850155 ECH
Dod05g1741 05 42849412 42850155 Dod09g0406 09 6106178 6107947 PCT