Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1720 ATGAGAAGGATTGCGAGGCCTCGGAGAAGGAAGTGTGGGCCTCAGTACCTGCTCCCGACAGAAGTGAGCAGGTGTGCCATCCGCAAGCCCCCAGAATGGATTCCCCTCTTGCAAATCCCCTCCCCGGACGTCCGAGCCGTCCGCACCACCCTCCTCCCCTTCCCGGACCTGCCCGACCCCTCCTGCAGGCAAACCGGCAACTGCCCTGTCACTCTCCTCTACACCGCCGATAACCAACCTTTTGGAGAGAATCTAGAGGTCAAATGTGTTCAGGGTTTAACTTTATGGCGTAATAGTGCTTCTGTTATAAACGATGAGCTATTTAAAGGTTATTACGGGGGTAACAAAGAAAACCAGACCAATGAGATAGTTGCAGCTTATGATCTTCTAAATTCGAATAAGAATATATTTAACGTCAGCATATGGTTCAACACAACCTATAAGAGGATCGAAGATCCATTCGATCCAGTTGCGTCTATGGATGAAAGTAGCAACATGATACGCGCTTCTCGTTTAGTAAATATGATATCAAATGCCTACCTGCAACTTCTGCGGGGACCTGGTACCATGATGTCCCTTGAGTTTTTAAAGGAAATGCCAAAATCTAGGAGCGCATCCACAGTAGATTTAGCTTCTGCTTTGAGTGGTCTGTTCTTTACCTGGATCGTCCTGCAACTATTTCCTGTTGTTCTGACATCGCTGGTATATGAGAAGCAACAAAATTTAAGAATCATGATGAAAATGCACGGTCTTAGTGATGGGCCATATTGGGTGATTTCGTATTGTTATTTTCTTGCCATATCAACGGTCTACATGGTGTGCTTTGTGATTATTGGCTCAATTTTAAGATTCAAATTCTTTACAGCGAATGACTACAGCATTCAATTTGTGTTTTATTTTATCTATATAAACTTACAAATTTCAATTGCGTTTCTGGGGGCGGGCATGTTTTCAAGTGTTAAGACTGCTACAGTGACAGCATATCTGTTTGTCTTCGGAACTGGGCTAGTAGCTAACTTTCTTTACGTTAATTTTATAGAACAAGAATCATTTCCAAGAGGATGGATCACTTTTATGGAGTTGTTTCCTGGGTTTGCTTTATATCGTGGGGTATATGAGTTTCGACATTATGCCCAGTTGGTAGTTTATAGAGGGGGTAAGGGTATGAGGTGGGGAAATCTAGATGATAAGGACAATGGCATGGAAAATATCTTAATCATCATGTATGTTGAGTGGATGCTGTTTCTTGCTGTCGGTTATTACGTCGATCAGGTTTTCACATCAGGAAAAAGTCCTCTCTTTTTCTTGATAGGATCTCAGAAAAAGCAACCTTCTTTAAACAGTGCCTCTATCAAAAGGCAGGGTTCAAACGCTTCGGCTGAGATGGAGAAATCTGACATCATCCTAGAGAGGGAGAAAGTGGGGCAGTTCCTAACTGAACCAACTATTAATCATGCAATGGTCTGTGACAACCTAAGAAAAGTTTATCCAGGGAGCGATGGAAACCCAGAGAAAGTTGCAGTGAAAGGAATGTTCCTTGCTGTGCCTCAAGGGGAATGCCTTGGTTTGCTTGGTCCCAATGGTGCTGGGAAAACTTCTTTTATCAGTATGATGACTGGTCTCTCAAGGCCAACCTCCGGCACGGCATATATTCAGGGCATGGACTTAAGAACTCAGATGGATGGAATATATACTACCATGGGCATATGCCCACAGTATGACTTGCTGTGGGAAACCTTGACAGGAAGAGAGCATCTACTTTTTTATGGGAGACTTAAAAATCTCAAAGGTGCAGTCTTAAAACAAGCAATAGAAGATTCTTTGACGAGTTTAAACCTTTTTCACGGAGGAGTTGCTGATAAAAAAGTTGGACAATACAGTGGAGGGATGAAGAGGAGGCTTAGTGTTGCAATCTCATTGATCGGGAATCCCAGTGTTGTTTATCTGGATGAGCCAAGTACTGGGTTAGACCCTGCATCAAGAAGCCGCTTATGGAATGTTATTAAAAATGCCAAAAGGGATCGTGCAATCATTCTCACCACTCATTCCATGGAAGAGGCAGAGGCCTTGTGTGATCGATTAGGAATATTTGTAAGCGGTGCCATGCAGTGCATAGGAAATGCAAAGGAGCTGAAAGCCAGATATGGAGGAACTTACGTGTTCACAATGACAACATCTTCGGATCATGAGGAGGAAGTGGAGAAGATAGTGCAGAAGCTCTCTCCAAATGCAAACAAGATATACCATCTCAGTGGAACCCAGAAGTATGAGCTGCCAAAGGCGGATGTTAGAATAGCGGATGTATTCAGAGCTGTTGAATTTGCAAAGAGAAACTTCACAGTTTCTGCATGGGGTTTAGCTGACACCACAATGGAAGATGTCTTCATTAAGGTAGCAGGTGCTCCTCGCCCATAA 2415 0.4344 MRRIARPRRRKCGPQYLLPTEVSRCAIRKPPEWIPLLQIPSPDVRAVRTTLLPFPDLPDPSCRQTGNCPVTLLYTADNQPFGENLEVKCVQGLTLWRNSASVINDELFKGYYGGNKENQTNEIVAAYDLLNSNKNIFNVSIWFNTTYKRIEDPFDPVASMDESSNMIRASRLVNMISNAYLQLLRGPGTMMSLEFLKEMPKSRSASTVDLASALSGLFFTWIVLQLFPVVLTSLVYEKQQNLRIMMKMHGLSDGPYWVISYCYFLAISTVYMVCFVIIGSILRFKFFTANDYSIQFVFYFIYINLQISIAFLGAGMFSSVKTATVTAYLFVFGTGLVANFLYVNFIEQESFPRGWITFMELFPGFALYRGVYEFRHYAQLVVYRGGKGMRWGNLDDKDNGMENILIIMYVEWMLFLAVGYYVDQVFTSGKSPLFFLIGSQKKQPSLNSASIKRQGSNASAEMEKSDIILEREKVGQFLTEPTINHAMVCDNLRKVYPGSDGNPEKVAVKGMFLAVPQGECLGLLGPNGAGKTSFISMMTGLSRPTSGTAYIQGMDLRTQMDGIYTTMGICPQYDLLWETLTGREHLLFYGRLKNLKGAVLKQAIEDSLTSLNLFHGGVADKKVGQYSGGMKRRLSVAISLIGNPSVVYLDEPSTGLDPASRSRLWNVIKNAKRDRAIILTTHSMEEAEALCDRLGIFVSGAMQCIGNAKELKARYGGTYVFTMTTSSDHEEEVEKIVQKLSPNANKIYHLSGTQKYELPKADVRIADVFRAVEFAKRNFTVSAWGLADTTMEDVFIKVAGAPRP* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1720 804 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 480 725 IPR027417 -
Dod05g1720 804 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 487 724 IPR003439 GO:0005524
Dod05g1720 804 CDD ABC_subfamily_A 491 712 - -
Dod05g1720 804 SMART AAA_5 517 700 IPR003593 -
Dod05g1720 804 PANTHER OS08G0398300 PROTEIN 84 799 - -
Dod05g1720 804 PANTHER OS08G0398300 PROTEIN 16 83 - -
Dod05g1720 804 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 16 83 IPR026082 GO:0016021|GO:0055085|GO:0140359
Dod05g1720 804 Pfam ABC-2 family transporter protein 198 374 - -
Dod05g1720 804 Pfam ABC transporter 510 653 IPR003439 GO:0005524
Dod05g1720 804 ProSitePatterns ABC transporters family signature. 626 640 IPR017871 GO:0005524
Dod05g1720 804 Gene3D - 478 754 IPR027417 -
Dod05g1720 804 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 84 799 IPR026082 GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1720 Dod-Chr5 42564153 42572232 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1720 491 711 Calmodulin-binding Proteins AT2G36910 25.221 6.46e-14 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1720 - - gmx:100805474 1028.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1720 05 42564153 42572232 Dod05g1720 05 42564153 42572232 ECH