Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1719 ATGGGGAAGTCACCAGCAAAATGGATCAAAACGGTTCTGTTTGGGAAGAAGTCTTCCAAATCAAAAGGAAGAGAGAAGCTTGTTAATCAAAAAGAAGGAGTTGTGACTTCCAAGGTGCCAGAAACTGGTTTGGCTTTAGATCTAACCCCCAATACCATTGCCAGAAATGAGGAGGAAGACCTGGAGCTGGAGAACAAAGAGGCAGAAACTGTTTTACCTGAAAACCAAGAGATAGACATAGTGGGATCTGTTCTCCAAGATGCACCACCTGATCCCGAGAAAACGAGGCAGGAGGAAGCAGCAACAAAGGCACAGGCTGCTTTTAGGGGTTATTTGGCTCGGAGGGCATTTAGGGCGCTAAAAGGCATAATAAGATTGCAAGCACTTATCCGTGGCCACTTGGTTAGGAGACAAGCTGTGGCGACATTATGCTGTATGCATGGGATTGTCAAGTTTCAAGCACTTGTTCGTGGAGGAAGAGTTAGACAAGCTGATGTTGGATTTGAAATCCAAGAGAAGTGCAATCTAATGAAGTCTCTGGATGGCAAACTTGTCAAGCCAATTGCTATACCCACAAAACTTATGAATCTGTCAGCGAATGCTTTCATCCGCAAGCTGCTTGCTTCATCAAGTACAATAATGGCCCTGCATCTGCAATACGTTCCGGGAGATCCGAATTCAGTCCTAAGTTGGTTGGAGCGCTGGTCAGCGACTCACTTTTGGAAACCAGTCTCCCAGCCCAAGAAAAGTAGAGACAAGAGAAAGCCGGGTAATATTTCAACTGGAGAATCTCAAATGAGTAAGTCGAAGCGTACGAACCGGAAGCTTCCTAGTGCAAATTTTGACTCAGTCCCAGTGCAAGCCAATCCTGAATCTGAAAAGCCTAAGCGAAACTTAAGGAAAATTTCAAGCCAGCCCTCGGATCCTGTGCAGGAAAATGCGCAAAATGAGCTTGAGAAGGTTAAGCGCAACTTGAGAAGGGTTCATAACCCAGTTGTTGAGAATGTTGTTGTGTCAGAAGTTGAATCTGAGGCTCCAAAGCAGCATTTTGAAAAGGCAACAATTACTCCAAGCCATGGTGTTTCAGAGCAAGGTGTCATAAGTTCTAATGAGAAGGTCAAGAAGGAAACAACATTAACCATTTCCAGTGTGCCTGATGTAGAAATTACTCCCACAAATTCCATTAATAAGGAGGTATCTGAGACTCGAAGCAGTAATCAAGTGACTGTGGAATCAAAGCCTTTGACAGAGATTACAAGTAAAGATGAAAACATTGCTGAAGATGAAGTGAAAAATGAGCCAAAAGATTTACCTGAGGCTAGTTGTAAGGTTGAAAATTCTCACATAACAAATGGAGATTTGAGTCACAAGGAAGATCTAGCCGGCAATGAAAACCAAAAACCTACCCTAAAAGCCTCCATTGTAGGAAAGCAGGAGCGTGCAGAGAATGGTTTACAAAATAGTCCAATGTTGCCAAGTTACATGGCAGCAACTGAATCTGCCAAGGCAAAGTTGAGGGCACAAGGATCCCCACGGTTTGGACAAGAAGGAAGCGAGAGAAACAACCTCGCCAGGCGACATTCTCTGCCATCTTCAACTAACAGCAAAATTAGTTCGCATTCACCTAGGACACAGAGACCAGTCCAAGCAGGTGGCAAAGGGGGCCACAGAAGTGACAGAACTGTGCCTTCTAGGGACGGGAATGGAAAGGTAATTCAAGCTGAGTGGAGGAGGTGA 1737 0.4462 MGKSPAKWIKTVLFGKKSSKSKGREKLVNQKEGVVTSKVPETGLALDLTPNTIARNEEEDLELENKEAETVLPENQEIDIVGSVLQDAPPDPEKTRQEEAATKAQAAFRGYLARRAFRALKGIIRLQALIRGHLVRRQAVATLCCMHGIVKFQALVRGGRVRQADVGFEIQEKCNLMKSLDGKLVKPIAIPTKLMNLSANAFIRKLLASSSTIMALHLQYVPGDPNSVLSWLERWSATHFWKPVSQPKKSRDKRKPGNISTGESQMSKSKRTNRKLPSANFDSVPVQANPESEKPKRNLRKISSQPSDPVQENAQNELEKVKRNLRRVHNPVVENVVVSEVESEAPKQHFEKATITPSHGVSEQGVISSNEKVKKETTLTISSVPDVEITPTNSINKEVSETRSSNQVTVESKPLTEITSKDENIAEDEVKNEPKDLPEASCKVENSHITNGDLSHKEDLAGNENQKPTLKASIVGKQERAENGLQNSPMLPSYMAATESAKAKLRAQGSPRFGQEGSERNNLARRHSLPSSTNSKISSHSPRTQRPVQAGGKGGHRSDRTVPSRDGNGKVIQAEWRR* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1719 578 ProSiteProfiles IQ motif profile. 97 125 IPR000048 GO:0005515
Dod05g1719 578 MobiDBLite consensus disorder prediction 524 546 - -
Dod05g1719 578 Pfam IQ calmodulin-binding motif 99 118 IPR000048 GO:0005515
Dod05g1719 578 Pfam IQ calmodulin-binding motif 121 138 IPR000048 GO:0005515
Dod05g1719 578 ProSiteProfiles IQ motif profile. 121 148 IPR000048 GO:0005515
Dod05g1719 578 PANTHER PROTEIN IQ-DOMAIN 31 1 567 - -
Dod05g1719 578 MobiDBLite consensus disorder prediction 498 578 - -
Dod05g1719 578 MobiDBLite consensus disorder prediction 392 441 - -
Dod05g1719 578 MobiDBLite consensus disorder prediction 392 415 - -
Dod05g1719 578 MobiDBLite consensus disorder prediction 243 314 - -
Dod05g1719 578 Pfam Protein of unknown function (DUF4005) 478 558 IPR025064 -
Dod05g1719 578 MobiDBLite consensus disorder prediction 416 441 - -
Dod05g1719 578 PANTHER IQ-DOMAIN 5-RELATED 1 567 - -
Dod05g1719 578 Coils Coil 51 71 - -
Dod05g1719 578 MobiDBLite consensus disorder prediction 259 287 - -
Dod05g1719 578 SMART iq_5 119 140 IPR000048 GO:0005515
Dod05g1719 578 SMART iq_5 96 118 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1719 Dod-Chr5 42547533 42554644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1719 1 578 IQD Protein Family AT1G74690 44.190 5.80e-125 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1719 - - gmx:100794636 841.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1057 04 30489622 30495260 Dod05g1719 05 42547533 42554644 ECH
Dod05g1719 05 42547533 42554644 Dod05g1719 05 42547533 42554644 ECH
Dod02g1599 02 19669035 19673213 Dod05g1719 05 42547533 42554644 PCT