Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1694 ATGGGACACAAGAAGCGAAACACCGCTCCGCGGTCCAAGCAATCGCCGACGGCGGCGCAATCCGCCGTTGTCGTCGGCGATGGTACCGCCTCGCCGGAACCGGACTCCACCAATGTCTCCGATCACACCAACCTCCCGAACCCTAGCAAGGTCGAATTGCCACCACCACCTCCACCACCACCACAACAACAACAACGACAACATCCTCCGCAATCCGAGGGTTCCGATTACTCCGGGATCAAGCTCGAGTGCGAGCGAGCCCTAACCGCGTTCCGCCGCGGGAACCACAACAGAGCGCTGAAGCTCATGAAGGAGCTCTGCGCGAAGCAAGACGAACCTGCTCACTCCGCCTTCGCTCACCGCGTTCAAGGATTCGTGTTCTTCAAGGTCGCCGGGATCATGAACGACCCTACCGTGAAGCAGCGGCACGTGAAGAACGCAATCGATTCGGCTCGTAGAGCCATTGAACTGTGCCCTAACTCGGTAGAGTACTCTCATTTCTACGCCAATTTGATGCTTGAAGCAGCGAATGATGGAAAAGATTACGAGGAAGTAGTGCAGGAGTGCGACAGGGCGCTTGCGATTGAGAACCCTAGCGATCCAGGGAAGGAGAGCTTCCAGGACGAGAGTGATCAGAAGCTGACGACTGCGGAGGCACGTGTTTCGCACGTGCAGAACGAGCTGCGGCAGCTGATTCAGAAGTCGAACATTGCTTCGCTCTCGAGTTGGGTGAAGAATCTGAGCAATGGAGAGGAGAGGTTCCGGTTGATTCCGATTCGGAGGCCTGCGGAGGATCCTATGGAGCTGAGGCTGGTTCAAACGAGGAGGCCGAACGAGATCAAGAAGGCGACGAAGACGCCCGAAGAGAGGAGGAAGGAGATTGAAGTGAGAGTTGCAGCTGCGAGGTTGTTGCAGCAGAAATCGGAGTCGTTGCCGCGATCTCCCGGCGAAGGGGATAATAAGGAAGAGAGGGCTTTGGATTCTAATTCTTCAGGGTCTGGTCAAAGGGTAGGAGGAGGAGGTGGAGGTGGAGGTGATAGGAGGAGGCATGGGAATTTGAGGAAGAATGGGTCTAGTGCTGAGAGGAGGAAATGGGTGCATTCTTATTGGAATTCAATGAGTTTGGATATGAAAAAGAACTTGCTTAGGGTTAGGGATTTCTGA 1164 0.5498 MGHKKRNTAPRSKQSPTAAQSAVVVGDGTASPEPDSTNVSDHTNLPNPSKVELPPPPPPPPQQQQRQHPPQSEGSDYSGIKLECERALTAFRRGNHNRALKLMKELCAKQDEPAHSAFAHRVQGFVFFKVAGIMNDPTVKQRHVKNAIDSARRAIELCPNSVEYSHFYANLMLEAANDGKDYEEVVQECDRALAIENPSDPGKESFQDESDQKLTTAEARVSHVQNELRQLIQKSNIASLSSWVKNLSNGEERFRLIPIRRPAEDPMELRLVQTRRPNEIKKATKTPEERRKEIEVRVAAARLLQQKSESLPRSPGEGDNKEERALDSNSSGSGQRVGGGGGGGGDRRRHGNLRKNGSSAERRKWVHSYWNSMSLDMKKNLLRVRDF* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1694 387 PANTHER INACTIVE UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 53-LIKE 1 385 - -
Dod05g1694 387 Coils Coil 214 234 - -
Dod05g1694 387 PANTHER UBIQUITIN SPECIFIC PROTEINASE 1 385 - -
Dod05g1694 387 MobiDBLite consensus disorder prediction 303 361 - -
Dod05g1694 387 Pfam Protein of unknown function (DUF627) 86 197 IPR006866 -
Dod05g1694 387 SUPERFAMILY TPR-like 86 197 IPR011990 GO:0005515
Dod05g1694 387 MobiDBLite consensus disorder prediction 347 361 - -
Dod05g1694 387 MobiDBLite consensus disorder prediction 31 47 - -
Dod05g1694 387 MobiDBLite consensus disorder prediction 49 66 - -
Dod05g1694 387 Gene3D Tetratricopeptide repeat domain 67 219 IPR011990 GO:0005515
Dod05g1694 387 MobiDBLite consensus disorder prediction 1 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1694 Dod-Chr5 42240128 42241291 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1694 76 385 C2H2 Transcription Factor Family AT3G47890 60.129 1.93e-115 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1694 - - adu:107493676 551.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1694 05 42240128 42241291 Dod05g1694 05 42240128 42241291 ECH