Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1687 ATGTCCCAACCATCTCCTCCTTCTCCGGCCACCGCCGACCGCCGATCCTCGCCGTCGCCGGAACCTAATTCCCAAAACCAGACCGCCGACGCTGCTCCCACGGAGGAAACCACCACTGATGCCGCCGCTGCTGCTGCTCCTCCTCCGCCAACCAATAGGAGCAACCGTCCCTCCCGGGCCTCTGCCATCCGCGCCGCCGCTCGCATCTGCTCCGTGCAGTCGCCGTTGGCGGCCGAACGGAAGCCGAAGGCCGGGAAGAAGGAGCAGCGCCGGCGGCATGAGGAGGAGGAATCGCTGCCGCCGTCGCCGATGCAGCAATGCGGAAGGATCGTGACGCCGCTAGTGGAACCGCCGCCGTCGCCGTCGCGGCTGCCGCGGTGGAACCTCCGGTGCATGTGGGAGTTCGCCTCCGTGCTTAATTTCTTGCATCTGTTTAGGCCTCTTTTGAATATATCACTTGAATTCTCTGCTGAAGAGTTGGAGACTGCTCTTCTTACTCCCAATGACACTTTGAGTGATATACATATGCCCTTGCTAAAGGCAATCCCTCCTATTATACGAATGGCCCTCACACGTGATACTTGGATAACCGTATTATGCCGAAAATTAAGGGATTGGTGGCATTGGGTTGCTGATGGGGATCTTCCAATTGTTGCTTCACATGGGGCGGAGATTGAAGTATATAAATCCCTTGATCCTTGGGTCCGTGTTGTCATCTTAAAAGCATTATGTGACATTCGTGTTGAGCAAGAGGATATCCGAAGTTATATTGACAACTCACTCAAACATGGTGTTCAACTGTCAACGTTTCGTAAAGAGCGTATTGGAGGTGATTCCTATGGAATTTCTTATTGGTATGAAGATGACCCAATTATTGGTCATAGGTTGTATCGGGAAACAAGAAAAACTGAAATTATTCAATTAAAGAAAGGGAAAGCTAGAGGTTCTAAGGTTCTTTCTAATACATCATACCAGTGGGAAGCTGTAGCCACCAATTTTGATGAATTTCAGGATGTTTCTGAGAAGCTTTTCTCTAGTAAAAACAGAACAGAAGTTTCTGTGGGGAAAAAGCTAAAGATAGACATGCTTCCTGTAATTGAGAAAGTTCATAAGAGAAAGGAGAGGTTGCTGAAAAAGCAACACAGAGAGGCTCTTCTTCTTGATAATTACTTGGTTATTGATGGTCTTGCTCCGGGGCGTTCACTTCGTGATAGGAAACGTGTTACCTACACTTTTGATGATTACGATAAGTCCATTAATGAGGCAATTAAAGTAACCAAACGGAAACAGCCATCCCCAGAACTCATGCACAGGAGAGAATCTGTAGCAAAACCAGGAGCTTTGACTAATGGTAAATGGATTGGTTCTTCACATGCTCCTCAACATCTGAATTTTGATATGCCATCTCCAAACTCACCTGACTTCATTGATGATGAGGAAGACCATAAAACTGACACACTGGATCGAAGCAACCGTCGAAGACAGAGACCTAACCGGTACTCAGAGAGAGAGTTTGTTGGAGCAGTATCAGATGTTGAGGCTGAGTTTGACAGTGACGATGATATTGTTGGAGAAGCTGTATATGATGAAGAATATCTTGAGAAGCGCAAGCAGAGAAGGAAGCTTTCTAGTAGCTCTGAAGGAGATGAAGAATATCAGTGGGATGAAGATAATGTTGAAGATGAAGAAGAAGAAGATGATGACGATGAAGATTCCTTGAGCATCAGTGAGGACAGTGACAAACCCCGTAAGTTCAGGCAATTCCCATGCCGTACTAGGAGTAGGAGGGAAACTAAACTCAGGTCTGTGGGTGAGATTCAATCAGGTCTAAGACGCAGCAAGAGGGCAACTAGAAATCGTATAAATTACCGACAATATGAAGCATCTGAATCAGAGGCAGAGTTTATTGAACCTGAGAAGTCTAATGCGTCAGCTGATCACTCAGACCCCAGTGAGAATGGCGAGTATATGATGGAAGGTGAAGATTCAGATGGTAATGATGATGAAGATCAGGAAATGAAAGTAGAGGAGGAGCCTGTTACTTATCCTGCAGGAGAGAATGAACAAAACCTACCTCCTGAAAAATCAAGTAGTGCTGGTCAGGAGGAAGTTCAGGGCATGGGAAAGAGACGTTTCCTCGATTTGAACGAGCTTGCCCCTAGTTCAGGTTTTGACGATGGTCCAAATACGATAATGAAAGATGAAAACACTGATTACTGA 2220 0.4649 MSQPSPPSPATADRRSSPSPEPNSQNQTADAAPTEETTTDAAAAAAPPPPTNRSNRPSRASAIRAAARICSVQSPLAAERKPKAGKKEQRRRHEEEESLPPSPMQQCGRIVTPLVEPPPSPSRLPRWNLRCMWEFASVLNFLHLFRPLLNISLEFSAEELETALLTPNDTLSDIHMPLLKAIPPIIRMALTRDTWITVLCRKLRDWWHWVADGDLPIVASHGAEIEVYKSLDPWVRVVILKALCDIRVEQEDIRSYIDNSLKHGVQLSTFRKERIGGDSYGISYWYEDDPIIGHRLYRETRKTEIIQLKKGKARGSKVLSNTSYQWEAVATNFDEFQDVSEKLFSSKNRTEVSVGKKLKIDMLPVIEKVHKRKERLLKKQHREALLLDNYLVIDGLAPGRSLRDRKRVTYTFDDYDKSINEAIKVTKRKQPSPELMHRRESVAKPGALTNGKWIGSSHAPQHLNFDMPSPNSPDFIDDEEDHKTDTLDRSNRRRQRPNRYSEREFVGAVSDVEAEFDSDDDIVGEAVYDEEYLEKRKQRRKLSSSSEGDEEYQWDEDNVEDEEEEDDDDEDSLSISEDSDKPRKFRQFPCRTRSRRETKLRSVGEIQSGLRRSKRATRNRINYRQYEASESEAEFIEPEKSNASADHSDPSENGEYMMEGEDSDGNDDEDQEMKVEEEPVTYPAGENEQNLPPEKSSSAGQEEVQGMGKRRFLDLNELAPSSGFDDGPNTIMKDENTDY* 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1687 739 MobiDBLite consensus disorder prediction 1 35 - -
Dod05g1687 739 MobiDBLite consensus disorder prediction 1 121 - -
Dod05g1687 739 MobiDBLite consensus disorder prediction 427 441 - -
Dod05g1687 739 MobiDBLite consensus disorder prediction 475 502 - -
Dod05g1687 739 MobiDBLite consensus disorder prediction 576 602 - -
Dod05g1687 739 PANTHER DDT DOMAIN-CONTAINING PROTEIN DDR4 31 738 - -
Dod05g1687 739 MobiDBLite consensus disorder prediction 534 548 - -
Dod05g1687 739 MobiDBLite consensus disorder prediction 655 675 - -
Dod05g1687 739 MobiDBLite consensus disorder prediction 454 468 - -
Dod05g1687 739 MobiDBLite consensus disorder prediction 80 99 - -
Dod05g1687 739 PANTHER REMODELING AND SPACING FACTOR 1 31 738 IPR028938 GO:0006355|GO:0031213
Dod05g1687 739 MobiDBLite consensus disorder prediction 549 575 - -
Dod05g1687 739 MobiDBLite consensus disorder prediction 625 646 - -
Dod05g1687 739 Pfam DDT domain 137 182 IPR018501 -
Dod05g1687 739 MobiDBLite consensus disorder prediction 534 739 - -
Dod05g1687 739 MobiDBLite consensus disorder prediction 427 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1687 Dod-Chr5 42152079 42162605 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Dod05g1687 DDT 1.3e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1687 - - gmx:100795519 1004.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1687 05 42152079 42162605 Dod09g0356 09 5323709 5331959 PCT