Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1686 ATGATGCCCTTCAAGATGACAGAGATGTGGACAACAATGGGGCCAACCTTAGCCAGCTTCATGTTTGTGTGGGCGATCATACGCCAGTACTGTCCGTATGAGGTGAGACGCTTCTTTGAGAAGTACACACACAGGATCACGGGATACTTCTACCCTTACATCAGAATCTCCTTCCATGAGTTCTTAGGGGACAGGCTCAAGCGCAGTGAGGCCTATACTGCTGTTGAGGCTTACCTCAGTGCCAACACATCAAAGAGTGCCAAGAGGCTCAAAGCTGAGATGGGAAAAGATAGCAGCGACTTGGTCCTGACCATGGATGAGTATGAGAGAGTCACTGATGACTTTGAGGGTACAAAAGTTTGGTGGGTCTCTAGCAAGGTCATGTCACCAACAAGGTCCATGTCATATTACCAAGAGCAAGAGAAGAGGTTCTACAAACTCACTTTTCACAAAAAGTATAGGGACTTGATCACTGGGAAGTATTTGGAGCATGTGATGAGGGAAGGGAAGGAGATTCGTTTGAGGAACAGGCAGAGGAAATTGTACACCAATAGCCCTGGTTACAAGTGGCCTAGTTACAAGCAAACCATGTGGAGCCACATTGTGTTTGAGCACCCCGCAACTTTTGAGACAATGGCCATGGAGCCTGAGAAGAAGCAGCAGATCATTGAGGATTTGGTTACTTTCAGCAAAAGCAAAGACTTCTATGCTAGGATTGGCAAGGCATGGAAGAGGGGTTACCTTCTCTATGGCCCTCCTGGTACTGGCAAGTCCACCATGATTGCAGCTATGGCTAACTTGCTGGCCTATGATGTCTACGACTTAGAGCTTACTGCAGTGAAGGACAACACTGAGCTGAGGAAGCTCTTGATCGAGACGACGAGTAAGTCAATAATTGTTATTGAGGACATTGATTGCTCACTTGATCTTACAGGCCAAAGGAAGAAGAAAGGTGATAAGTTGTCAGATGATGAGAATGATAAGGTGAGCTTAGAACTTGGGAGGAAAGAAGCCAAGGAAGATGGGAGCTGTGGTAGCAAAGTGACACTCTCAGGGATCTTGAATTTCATAGATGGGATATGGTCTGCATGTGGAGGGGAGAGGTTGATTGTGTTCACTACTAATTATATGGACAAGCTTGATCCAGCACTGATCAGAAGGGGTAGAATGGACAAGCACATAGAGCTTTCCTACTGCAGCTTTGATGGGTTCAAAGTGCTTGCAAAGAATTACTTGAAGCTTGAGACTCATCCAATGTTTGATACAATTCAGAGGCTAATAGGGGAGATCAAGATCACCCCAGCTGATGTTGCTGAGAACCTTATGCCTAAGTCTCCCTTGGATGATGCAGACAAGTGTCTTTCAAGCTTGATTGAAGCACTTGAGGAAGCAGCAGCTGCTACAAAAGCTGAGGAACTGAGACAGAGTAGCCCCATAAAGGAACATGAGGAACTGAAGCACACTAGACACATTAAGGAAAATGGTGAGGTAAAGGAGGACACAGAAACTTATCAAGCAAAAAACCAAAGCCAGCTATAG 1539 0.4568 MMPFKMTEMWTTMGPTLASFMFVWAIIRQYCPYEVRRFFEKYTHRITGYFYPYIRISFHEFLGDRLKRSEAYTAVEAYLSANTSKSAKRLKAEMGKDSSDLVLTMDEYERVTDDFEGTKVWWVSSKVMSPTRSMSYYQEQEKRFYKLTFHKKYRDLITGKYLEHVMREGKEIRLRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATFETMAMEPEKKQQIIEDLVTFSKSKDFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLAYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKGDKLSDDENDKVSLELGRKEAKEDGSCGSKVTLSGILNFIDGIWSACGGERLIVFTTNYMDKLDPALIRRGRMDKHIELSYCSFDGFKVLAKNYLKLETHPMFDTIQRLIGEIKITPADVAENLMPKSPLDDADKCLSSLIEALEEAAAATKAEELRQSSPIKEHEELKHTRHIKENGEVKEDTETYQAKNQSQL* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1686 512 Pfam Domain associated at C-terminal with AAA 32 124 IPR025753 -
Dod05g1686 512 CDD AAA 244 398 - -
Dod05g1686 512 SMART AAA_5 243 400 IPR003593 -
Dod05g1686 512 MobiDBLite consensus disorder prediction 469 512 - -
Dod05g1686 512 ProSitePatterns AAA-protein family signature. 368 387 IPR003960 GO:0005524|GO:0016887
Dod05g1686 512 Pfam ATPase family associated with various cellular activities (AAA) 248 397 IPR003959 GO:0005524|GO:0016887
Dod05g1686 512 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 105 462 IPR027417 -
Dod05g1686 512 PANTHER ATP BINDING PROTEIN 7 494 - -
Dod05g1686 512 MobiDBLite consensus disorder prediction 469 503 - -
Dod05g1686 512 Gene3D - 395 453 - -
Dod05g1686 512 Gene3D - 199 394 IPR027417 -
Dod05g1686 512 PANTHER BCS1 AAA-TYPE ATPASE 7 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1686 Dod-Chr5 42150025 42151895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1686 208 424 Miscellaneous Gene Families AT5G58870 27.556 1.00e-11 65.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1686 05 42150025 42151895 Dod02g2526 02 55778750 55780179 ECH
Dod05g1686 05 42150025 42151895 Dod05g1686 05 42150025 42151895 ECH